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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_17g719550v5   uncharacterized protein 
 ath-u.5   AT5G58575   SAGA-associated factor-like protein 
 gma-u.5   100802564   ataxin-7-like protein 3-like 
 gma-u.5   100798460   ataxin-7-like protein 3-like 
 sly-u.5   101253799   SAGA-associated factor 11 
 osa-u.5   4338504   SAGA-associated factor 11 
 zma-u.5   100276869   uncharacterized LOC100276869 
 bra-r.6   103856673   SAGA-associated factor 11 
 vvi-u.5   100854968   SAGA-associated factor 11 
 ppo-u.5   7475005   SAGA-associated factor 11 
 ppo-u.5   7496793   SAGA-associated factor 11 
 mtr-u.5   25490955   SAGA-associated factor 11 
 tae-r.2   123052682   SAGA-associated factor 11 
 tae-r.2   123181720   SAGA-associated factor 11 
 tae-r.2   123128999   SAGA-associated factor 11 
 hvu-r.1   123441149   SAGA-associated factor 11 
 ghi-r.1   107936062   SAGA-associated factor 11 
 ghi-r.1   107957661   SAGA-associated factor 11 
 bna-r.1   106385187   SAGA-associated factor 11-like 
 bna-r.1   106443249   SAGA-associated factor 11 
 sbi-r.1   8083748   SAGA-associated factor 11 homolog 
 sot-r.1   102594127   ataxin-7-like protein 3 
 cit-r.1   102606607   SAGA-associated factor 11 
 nta-r.1   107793283   SAGA-associated factor 11 
 nta-r.1   142176713   SAGA-associated factor 11-like 

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Top 50 coexpressed genes to CHLRE_17g719550v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_17g719550v5 (cre-r.1 coexpression data)

CoexMap"5729333"


creCHLRE_17g719550v5 | Entrez gene ID : 5729333      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit nta bdi
Paralog 1 1 2 1 1 1 1 1 2 1 3 1 2 2 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_001703794.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  cyto 1,  plas 1,  vacu 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_001703794.1)
Subcellular
localization
TargetP
other 7,  mito 6  (predict for XP_001703794.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_17g719550v5
ath-u.5
for
AT5G58575
gma-u.5
for
100802564
gma-u.5
for
100798460
sly-u.5
for
101253799
osa-u.5
for
4338504
zma-u.5
for
100276869
bra-r.6
for
103856673
vvi-u.5
for
100854968
ppo-u.5
for
7475005
ppo-u.5
for
7496793
mtr-u.5
for
25490955
tae-r.2
for
123052682
tae-r.2
for
123181720
tae-r.2
for
123128999
hvu-r.1
for
123441149
ghi-r.1
for
107936062
ghi-r.1
for
107957661
bna-r.1
for
106385187
bna-r.1
for
106443249
sbi-r.1
for
8083748
sot-r.1
for
102594127
cit-r.1
for
102606607
nta-r.1
for
107793283
nta-r.1
for
142176713


Ortholog ID: 10408
Species cre ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit nta nta
Symbol CHLRE_17g719550v5 AT5G58575 LOC100802564 LOC100798460 LOC101253799 LOC4338504 LOC100276869 LOC103856673 LOC100854968 LOC7475005 LOC7496793 LOC25490955 LOC123052682 LOC123181720 LOC123128999 LOC123441149 LOC107936062 LOC107957661 LOC106385187 LOC106443249 LOC8083748 LOC102594127 LOC102606607 LOC107793283 LOC142176713
Function* uncharacterized protein SAGA-associated factor-like protein ataxin-7-like protein 3-like ataxin-7-like protein 3-like SAGA-associated factor 11 SAGA-associated factor 11 uncharacterized LOC100276869 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11-like SAGA-associated factor 11 SAGA-associated factor 11 homolog ataxin-7-like protein 3 SAGA-associated factor 11 SAGA-associated factor 11 SAGA-associated factor 11-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00190 Oxidative phosphorylation 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00190 Oxidative phosphorylation 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna04130 SNARE interactions in vesicular transport 4
bna03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 6
bna03022 Basal transcription factors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta04120 Ubiquitin mediated proteolysis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5729333 835971 100802564 100798460 101253799 4338504 100276869 103856673 100854968 7475005 7496793 25490955 123052682 123181720 123128999 123441149 107936062 107957661 106385187 106443249 8083748 102594127 102606607 107793283 142176713
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