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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g016528v5   uncharacterized protein 
 ath-u.5   AT5G53850   haloacid dehalogenase-like hydrolase family protein 
 gma-u.5   100796209   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 gma-u.5   100794485   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 gma-u.5   100817732   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 sly-u.5   101266369   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 
 sly-u.5   101257584   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 
 osa-u.5   4350524   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 osa-u.5   4326460   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 zma-u.5   100282341   Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 zma-u.5   100194257   uncharacterized LOC100194257 
 bra-r.6   103852010   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 bra-r.6   103844853   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 vvi-u.5   100257258   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 
 vvi-u.5   100247253   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 ppo-u.5   18095573   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 mtr-u.5   25487335   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 tae-r.2   123110845   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 tae-r.2   123102660   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 tae-r.2   123068717   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 hvu-r.1   123452241   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 ghi-r.1   107895267   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 ghi-r.1   107917240   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 ghi-r.1   107920116   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 bna-r.1   106418418   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 bna-r.1   106390719   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 bna-r.1   106380953   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 sbi-r.1   8155324   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 sot-r.1   102598247   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 
 sot-r.1   102592458   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 
 cit-r.1   102631398   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 bdi-r.1   100828599   probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 
 nta-r.1   107817457   putative bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 
 nta-r.1   107797741   putative bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 
 nta-r.1   107782969   putative bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 

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Top 50 coexpressed genes to CHLRE_01g016528v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g016528v5 (cre-r.1 coexpression data)

CoexMap"66052003"


creCHLRE_01g016528v5 | Entrez gene ID : 66052003    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 2 2 2 2 2 1 1 3 1 3 3 1 2 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00270 [list] [network] Cysteine and methionine metabolism (53 genes)
GO BP
GO:0019509 [list] [network] L-methionine salvage from methylthioadenosine  (3 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0043874 [list] [network] acireductone synthase activity  (1 genes)  IEA  
GO:0046570 [list] [network] methylthioribulose 1-phosphate dehydratase activity  (1 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (45 genes)  IEA  
Protein XP_042928316.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 1,  cysk 1,  cyto_pero 1  (predict for XP_042928316.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042928316.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g016528v5
ath-u.5
for
AT5G53850
gma-u.5
for
100796209
gma-u.5
for
100794485
gma-u.5
for
100817732
sly-u.5
for
101266369
sly-u.5
for
101257584
osa-u.5
for
4350524
osa-u.5
for
4326460
zma-u.5
for
100282341
zma-u.5
for
100194257
bra-r.6
for
103852010
bra-r.6
for
103844853
vvi-u.5
for
100257258
vvi-u.5
for
100247253
ppo-u.5
for
18095573
mtr-u.5
for
25487335
tae-r.2
for
123110845
tae-r.2
for
123102660
tae-r.2
for
123068717
hvu-r.1
for
123452241
ghi-r.1
for
107895267
ghi-r.1
for
107917240
ghi-r.1
for
107920116
bna-r.1
for
106418418
bna-r.1
for
106390719
bna-r.1
for
106380953
sbi-r.1
for
8155324
sot-r.1
for
102598247
sot-r.1
for
102592458
cit-r.1
for
102631398
bdi-r.1
for
100828599
nta-r.1
for
107817457
nta-r.1
for
107797741
nta-r.1
for
107782969


Ortholog ID: 4994
Species cre ath gma gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot sot cit bdi nta nta nta
Symbol CHLRE_01g016528v5 AT5G53850 LOC100796209 LOC100794485 LOC100817732 LOC101266369 LOC101257584 LOC4350524 LOC4326460 LOC100282341 LOC100194257 LOC103852010 LOC103844853 LOC100257258 LOC100247253 LOC18095573 LOC25487335 LOC123110845 LOC123102660 LOC123068717 LOC123452241 LOC107895267 LOC107917240 LOC107952099 LOC106390719 LOC106380953 LOC106371273 LOC8155324 LOC102598247 LOC102592458 LOC102631398 LOC100828599 LOC107797741 LOC107782969 LOC107795281
Function* uncharacterized protein haloacid dehalogenase-like hydrolase family protein probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 uncharacterized LOC100194257 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 putative bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 putative bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 putative bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 8
cre01210 2-Oxocarboxylic acid metabolism 4
cre01240 Biosynthesis of cofactors 3
cre00270 Cysteine and methionine metabolism 3
cre00290 Valine, leucine and isoleucine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00270 Cysteine and methionine metabolism 2
ath00010 Glycolysis / Gluconeogenesis 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 4
gma00053 Ascorbate and aldarate metabolism 2
gma00480 Glutathione metabolism 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 5
gma00270 Cysteine and methionine metabolism 3
gma00053 Ascorbate and aldarate metabolism 2
gma00480 Glutathione metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 4
sly00480 Glutathione metabolism 3
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 7
osa00999 Biosynthesis of various plant secondary metabolites 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 6
zma01230 Biosynthesis of amino acids 4
zma00920 Sulfur metabolism 2
zma01200 Carbon metabolism 2
zma01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 3
bra01200 Carbon metabolism 3
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 6
bra01200 Carbon metabolism 5
bra01240 Biosynthesis of cofactors 3
bra00010 Glycolysis / Gluconeogenesis 3
bra00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00020 Citrate cycle (TCA cycle) 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 13
tae00230 Purine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 10
tae00340 Histidine metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 6
hvu04145 Phagosome 6
hvu01200 Carbon metabolism 2
hvu00270 Cysteine and methionine metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 3
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 3
ghi00071 Fatty acid degradation 2
ghi00592 alpha-Linolenic acid metabolism 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 3
ghi00071 Fatty acid degradation 2
ghi00592 alpha-Linolenic acid metabolism 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 5
sbi00360 Phenylalanine metabolism 3
sbi00380 Tryptophan metabolism 3
sbi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 5
bdi00230 Purine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 5
nta00100 Steroid biosynthesis 2
nta00350 Tyrosine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66052003 835466 100796209 100794485 100817732 101266369 101257584 4350524 4326460 100282341 100194257 103852010 103844853 100257258 100247253 18095573 25487335 123110845 123102660 123068717 123452241 107895267 107917240 107952099 106390719 106380953 106371273 8155324 102598247 102592458 102631398 100828599 107797741 107782969 107795281
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