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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g146600v5   uncharacterized protein 
 ath-u.5   AT4G24550   Clathrin adaptor complexes medium subunit family protein 
 gma-u.5   100811592   AP-4 complex subunit mu-like 
 gma-u.5   100807075   AP-4 complex subunit mu 
 gma-u.5   100800985   AP-4 complex subunit mu 
 sly-u.5   101252774   AP-4 complex subunit mu 
 osa-u.5   4343931   AP-4 complex subunit mu 
 zma-u.5   100272249   uncharacterized LOC100272249 
 bra-r.6   103862264   AP-4 complex subunit mu 
 bra-r.6   103834903   AP-4 complex subunit mu 
 vvi-u.5   100254067   AP-4 complex subunit mu 
 ppo-u.5   7461819   AP-4 complex subunit mu 
 mtr-u.5   25490218   AP-4 complex subunit mu 
 mtr-u.5   11437134   AP-4 complex subunit mu 
 tae-r.2   123187920   AP-4 complex subunit mu 
 tae-r.2   123052054   AP-4 complex subunit mu 
 tae-r.2   123044174   AP-4 complex subunit mu 
 hvu-r.1   123425265   AP-4 complex subunit mu 
 ghi-r.1   107943315   AP-4 complex subunit mu 
 ghi-r.1   121217833   AP-4 complex subunit mu 
 ghi-r.1   107957817   AP-4 complex subunit mu 
 bna-r.1   106348920   AP-4 complex subunit mu 
 bna-r.1   106427792   AP-4 complex subunit mu 
 bna-r.1   106396522   AP-4 complex subunit mu-like 
 sbi-r.1   8079208   AP-4 complex subunit mu 
 sot-r.1   102581462   AP-4 complex subunit mu 
 cit-r.1   102624963   AP-4 complex subunit mu 
 bdi-r.1   100820878   AP-4 complex subunit mu 
 nta-r.1   107784896   AP-4 complex subunit mu-like 
 nta-r.1   107774321   AP-4 complex subunit mu 

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Top 50 coexpressed genes to CHLRE_02g146600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g146600v5 (cre-r.1 coexpression data)

CoexMap"66052646"


creCHLRE_02g146600v5 | Entrez gene ID : 66052646    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 1 1 1 2 1 1 2 3 1 3 3 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04142 [list] [network] Lysosome (27 genes)
GO BP
GO:0090160 [list] [network] Golgi to lysosome transport  (1 genes)  IEA  
GO:0006605 [list] [network] protein targeting  (53 genes)  IEA  
GO CC
GO:0030131 [list] [network] clathrin adaptor complex  (10 genes)  IEA  
GO:0005802 [list] [network] trans-Golgi network  (29 genes)  IEA  
GO:0031410 [list] [network] cytoplasmic vesicle  (127 genes)  IEA  
GO MF
Protein XP_042927708.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 4  (predict for XP_042927708.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042927708.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g146600v5
ath-u.5
for
AT4G24550
gma-u.5
for
100811592
gma-u.5
for
100807075
gma-u.5
for
100800985
sly-u.5
for
101252774
osa-u.5
for
4343931
zma-u.5
for
100272249
bra-r.6
for
103862264
bra-r.6
for
103834903
vvi-u.5
for
100254067
ppo-u.5
for
7461819
mtr-u.5
for
25490218
mtr-u.5
for
11437134
tae-r.2
for
123187920
tae-r.2
for
123052054
tae-r.2
for
123044174
hvu-r.1
for
123425265
ghi-r.1
for
107943315
ghi-r.1
for
121217833
ghi-r.1
for
107957817
bna-r.1
for
106348920
bna-r.1
for
106427792
bna-r.1
for
106396522
sbi-r.1
for
8079208
sot-r.1
for
102581462
cit-r.1
for
102624963
bdi-r.1
for
100820878
nta-r.1
for
107784896
nta-r.1
for
107774321


Ortholog ID: 6622
Species cre ath gma gma gma sly osa zma bra bra vvi ppo mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_02g146600v5 AT4G24550 LOC100811592 LOC100807075 LOC100800985 LOC101252774 LOC4343931 LOC100272249 LOC103862264 LOC103834903 LOC100254067 LOC7461819 LOC25490218 LOC11437134 LOC123187920 LOC123052054 LOC123044174 LOC123425265 LOC107943315 LOC121217833 LOC107957817 LOC106348920 LOC106396522 LOC106427420 LOC8079208 LOC102581462 LOC102624963 LOC100820878 LOC107784896 LOC107774321
Function* uncharacterized protein Clathrin adaptor complexes medium subunit family protein AP-4 complex subunit mu-like AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu uncharacterized LOC100272249 AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu-like AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu AP-4 complex subunit mu-like AP-4 complex subunit mu
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
cre04145 Phagosome 4
cre04142 Lysosome 3
cre03420 Nucleotide excision repair 2
cre04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 8
ath00510 N-Glycan biosynthesis 5
ath00513 Various types of N-glycan biosynthesis 5
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 3
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 6
sly04144 Endocytosis 3
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04145 Phagosome 3
osa04144 Endocytosis 2
osa04142 Lysosome 2
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra04142 Lysosome 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00410 beta-Alanine metabolism 2
mtr00562 Inositol phosphate metabolism 2
mtr00640 Propanoate metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr04145 Phagosome 6
mtr04142 Lysosome 4
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae03060 Protein export 2
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 3
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 2
hvu00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 5
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 5
bna00190 Oxidative phosphorylation 2
bna04075 Plant hormone signal transduction 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 5
bna00190 Oxidative phosphorylation 2
bna04075 Plant hormone signal transduction 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi00190 Oxidative phosphorylation 3
sbi04145 Phagosome 3
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 6
sot00190 Oxidative phosphorylation 3
sot04145 Phagosome 3
sot04142 Lysosome 3
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66052646 828557 100811592 100807075 100800985 101252774 4343931 100272249 103862264 103834903 100254067 7461819 25490218 11437134 123187920 123052054 123044174 123425265 107943315 121217833 107957817 106348920 106396522 106427420 8079208 102581462 102624963 100820878 107784896 107774321
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