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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g146707v5   uncharacterized protein 
 ath-u.5   JOSL   JOSEPHIN-like protein 
 gma-u.5   100814201   josephin-like protein 
 gma-u.5   100800726   josephin-like protein 
 sly-u.5   101267342   josephin-like protein 
 osa-u.5   4332346   josephin-like protein 
 zma-u.5   100282423   uncharacterized LOC100282423 
 bra-r.6   103868249   josephin-like protein 
 vvi-u.5   100243268   josephin-like protein 
 ppo-u.5   7478544   josephin-like protein 
 mtr-u.5   11413475   josephin-like protein 
 tae-r.2   123097968   josephin-like protein 
 tae-r.2   123092664   josephin-like protein 
 tae-r.2   123085377   josephin-like protein 
 hvu-r.1   123449075   josephin-like protein 
 ghi-r.1   107959176   josephin-like protein 
 ghi-r.1   107906607   josephin-like protein 
 bna-r.1   111215710   josephin-like protein 
 bna-r.1   106434100   josephin-like protein 
 sbi-r.1   8078806   josephin-like protein 
 sot-r.1   102598337   josephin-like protein 
 cit-r.1   102621610   josephin-like protein 
 bdi-r.1   100846139   josephin-like protein 
 nta-r.1   107775198   josephin-like protein 
 nta-r.1   107759602   josephin-like protein 

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Top 50 coexpressed genes to CHLRE_03g146707v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g146707v5 (cre-r.1 coexpression data)

CoexMap""


creCHLRE_03g146707v5 | Entrez gene ID : 66052694    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
Function uncharacterized protein
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (65 genes)  IEA  
GO CC
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (41 genes)  IEA  
Protein XP_042925593.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 3,  nucl_plas 1,  chlo 1,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_042925593.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_042925593.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g146707v5
ath-u.5
for
JOSL
gma-u.5
for
100814201
gma-u.5
for
100800726
sly-u.5
for
101267342
osa-u.5
for
4332346
zma-u.5
for
100282423
bra-r.6
for
103868249
vvi-u.5
for
100243268
ppo-u.5
for
7478544
mtr-u.5
for
11413475
tae-r.2
for
123097968
tae-r.2
for
123092664
tae-r.2
for
123085377
hvu-r.1
for
123449075
ghi-r.1
for
107959176
ghi-r.1
for
107906607
bna-r.1
for
111215710
bna-r.1
for
106434100
sbi-r.1
for
8078806
sot-r.1
for
102598337
cit-r.1
for
102621610
bdi-r.1
for
100846139
nta-r.1
for
107775198
nta-r.1
for
107759602

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Ortholog ID: 8404
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_03g146707v5 JOSL LOC100814201 LOC100800726 LOC101267342 LOC4332346 LOC100282423 LOC103868249 LOC100243268 LOC7478544 LOC11413475 LOC123097968 LOC123092664 LOC123085377 LOC123449075 LOC107959176 LOC107906607 LOC111215710 LOC106434100 LOC8078806 LOC102598337 LOC102621610 LOC100846139 LOC107775198 LOC107759602
Function* uncharacterized protein JOSEPHIN-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein uncharacterized LOC100282423 josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein josephin-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae00240 Pyrimidine metabolism 4
tae00410 beta-Alanine metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 5
tae01232 Nucleotide metabolism 5
tae00410 beta-Alanine metabolism 4
tae04146 Peroxisome 4
tae00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 4
tae04141 Protein processing in endoplasmic reticulum 4
tae00410 beta-Alanine metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00904 Diterpenoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66052694 817514 100814201 100800726 101267342 4332346 100282423 103868249 100243268 7478544 11413475 123097968 123092664 123085377 123449075 107959176 107906607 111215710 106434100 8078806 102598337 102621610 100846139 107775198 107759602
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