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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_04g212401v5   uncharacterized protein 
 cre-r.1   CHLRE_08g383702v5   uncharacterized protein 
 ath-u.5   UBC25   ubiquitin-conjugating enzyme 25 
 ath-u.5   AT1G53025   Ubiquitin-conjugating enzyme family protein 
 gma-u.5   100797350   putative ubiquitin-conjugating enzyme E2 38 
 sly-u.5   101261893   uncharacterized LOC101261893 
 sly-u.5   101244501   putative ubiquitin-conjugating enzyme E2 38 
 sly-u.5   101267744   probable ubiquitin-conjugating enzyme E2 26 
 osa-u.5   9272170   probable ubiquitin-conjugating enzyme E2 25 
 osa-u.5   9268935   probable ubiquitin-conjugating enzyme E2 25 
 zma-u.5   100502472   putative ubiquitin-conjugating enzyme E2 25 
 zma-u.5   100384586   uncharacterized LOC100384586 
 zma-u.5   103628268   probable ubiquitin-conjugating enzyme E2 25 
 bra-r.6   103840805   probable ubiquitin-conjugating enzyme E2 25 
 bra-r.6   103862491   probable ubiquitin-conjugating enzyme E2 23 
 vvi-u.5   100241396   putative ubiquitin-conjugating enzyme E2 39 
 vvi-u.5   100264294   putative ubiquitin-conjugating enzyme E2 38 
 vvi-u.5   100262286   probable ubiquitin-conjugating enzyme E2 26 
 ppo-u.5   18095585   probable ubiquitin-conjugating enzyme E2 25 
 ppo-u.5   18104628   putative ubiquitin-conjugating enzyme E2 38 
 mtr-u.5   112418640   putative ubiquitin-conjugating enzyme E2 38 
 mtr-u.5   120575770   putative ubiquitin-conjugating enzyme E2 39 
 tae-r.2   123069374   probable ubiquitin-conjugating enzyme E2 26 
 tae-r.2   123145120   putative ubiquitin-conjugating enzyme E2 38 
 hvu-r.1   123443268   probable ubiquitin-conjugating enzyme E2 26 
 hvu-r.1   123444100   putative ubiquitin-conjugating enzyme E2 38 
 hvu-r.1   123427740   probable ubiquitin-conjugating enzyme E2 25 
 ghi-r.1   107902660   probable ubiquitin-conjugating enzyme E2 26 
 ghi-r.1   107928783   putative ubiquitin-conjugating enzyme E2 38 
 bna-r.1   125598498   probable ubiquitin-conjugating enzyme E2 26 
 bna-r.1   106401376   probable ubiquitin-conjugating enzyme E2 25 
 bna-r.1   106379602   probable ubiquitin-conjugating enzyme E2 26 
 sbi-r.1   110433916   putative ubiquitin-conjugating enzyme E2 38 
 sbi-r.1   8066641   putative ubiquitin-conjugating enzyme E2 38 
 sbi-r.1   8077561   putative ubiquitin-conjugating enzyme E2 38 
 sot-r.1   102587645   uncharacterized LOC102587645 
 sot-r.1   102593834   putative ubiquitin-conjugating enzyme E2 38 
 sot-r.1   102596954   probable ubiquitin-conjugating enzyme E2 25 
 cit-r.1   102608976   putative ubiquitin-conjugating enzyme E2 38 
 cit-r.1   102616731   putative ubiquitin-conjugating enzyme E2 38 
 cit-r.1   102627978   uncharacterized LOC102627978 
 bdi-r.1   100822941   putative ubiquitin-conjugating enzyme E2 38 
 bdi-r.1   100845785   putative ubiquitin-conjugating enzyme E2 38 
 bdi-r.1   100839385   putative ubiquitin-conjugating enzyme E2 38 
 nta-r.1   107801604   uncharacterized LOC107801604 
 nta-r.1   107792179   putative ubiquitin-conjugating enzyme E2 38 

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Top 50 coexpressed genes to CHLRE_04g212401v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_04g212401v5 (cre-r.1 coexpression data)

CoexMap"66053103"


creCHLRE_04g212401v5 | Entrez gene ID : 66053103    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 2 1 3 2 3 2 3 2 2 2 3 2 3 3 3 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (9 genes)  IEA  
Protein XP_042925160.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  E.R._plas 3,  E.R. 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_042925160.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042925160.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_04g212401v5
cre-r.1
for
CHLRE_08g383702v5
ath-u.5
for
UBC25
ath-u.5
for
AT1G53025
gma-u.5
for
100797350
sly-u.5
for
101261893
sly-u.5
for
101244501
sly-u.5
for
101267744
osa-u.5
for
9272170
osa-u.5
for
9268935
zma-u.5
for
100502472
zma-u.5
for
100384586
zma-u.5
for
103628268
bra-r.6
for
103840805
bra-r.6
for
103862491
vvi-u.5
for
100241396
vvi-u.5
for
100264294
vvi-u.5
for
100262286
ppo-u.5
for
18095585
ppo-u.5
for
18104628
mtr-u.5
for
112418640
mtr-u.5
for
120575770
tae-r.2
for
123069374
tae-r.2
for
123145120
hvu-r.1
for
123443268
hvu-r.1
for
123444100
hvu-r.1
for
123427740
ghi-r.1
for
107902660
ghi-r.1
for
107928783
bna-r.1
for
125598498
bna-r.1
for
106401376
bna-r.1
for
106379602
sbi-r.1
for
110433916
sbi-r.1
for
8066641
sbi-r.1
for
8077561
sot-r.1
for
102587645
sot-r.1
for
102593834
sot-r.1
for
102596954
cit-r.1
for
102608976
cit-r.1
for
102616731
cit-r.1
for
102627978
bdi-r.1
for
100822941
bdi-r.1
for
100845785
bdi-r.1
for
100839385
nta-r.1
for
107801604
nta-r.1
for
107792179


Ortholog ID: 431
Species cre cre ath ath gma gma sly sly sly osa osa osa zma zma zma bra bra bra vvi vvi vvi ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sbi sot sot sot cit cit cit bdi bdi bdi nta nta
Symbol CHLRE_04g212401v5 CHLRE_08g383702v5 UBC25 AT1G53025 LOC100810772 LOC100812552 LOC101261893 LOC101244501 LOC101267744 LOC9272170 LOC4324280 LOC4346643 LOC100384586 LOC103640386 LOC103653924 LOC103840805 LOC103868465 LOC103832701 LOC100241396 LOC100264294 LOC100262286 LOC18104628 LOC120575770 LOC123077891 LOC123077892 LOC123443268 LOC123443273 LOC107886776 LOC107909291 LOC125598498 LOC125586979 LOC110433916 LOC8066641 LOC8077561 LOC102587645 LOC102593834 LOC102596954 LOC102608976 LOC102616731 LOC102627978 LOC100822941 LOC100829288 LOC100825985 LOC107801604 LOC107792179
Function* uncharacterized protein uncharacterized protein ubiquitin-conjugating enzyme 25 Ubiquitin-conjugating enzyme family protein uncharacterized LOC100810772 putative ubiquitin-conjugating enzyme E2 38 uncharacterized LOC101261893 putative ubiquitin-conjugating enzyme E2 38 probable ubiquitin-conjugating enzyme E2 26 probable ubiquitin-conjugating enzyme E2 25 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 uncharacterized LOC100384586 probable ubiquitin-conjugating enzyme E2 26 putative ubiquitin-conjugating enzyme E2 38 probable ubiquitin-conjugating enzyme E2 25 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 39 putative ubiquitin-conjugating enzyme E2 38 probable ubiquitin-conjugating enzyme E2 26 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 39 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 probable ubiquitin-conjugating enzyme E2 26 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 probable ubiquitin-conjugating enzyme E2 26 probable ubiquitin-conjugating enzyme E2 25 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 uncharacterized LOC102587645 putative ubiquitin-conjugating enzyme E2 38 probable ubiquitin-conjugating enzyme E2 25 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 uncharacterized LOC102627978 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 putative ubiquitin-conjugating enzyme E2 38 uncharacterized LOC107801604 putative ubiquitin-conjugating enzyme E2 38
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 5
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04120 Ubiquitin mediated proteolysis 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma00280 Valine, leucine and isoleucine degradation 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 5
osa00260 Glycine, serine and threonine metabolism 3
osa01210 2-Oxocarboxylic acid metabolism 3
osa00261 Monobactam biosynthesis 2
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi00071 Fatty acid degradation 3
sbi01212 Fatty acid metabolism 3
sbi04120 Ubiquitin mediated proteolysis 3
sbi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 3
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03010 Ribosome 4
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03050 Proteasome 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
nta04146 Peroxisome 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66053103 5719818 820772 10723113 100810772 100812552 101261893 101244501 101267744 9272170 4324280 4346643 100384586 103640386 103653924 103840805 103868465 103832701 100241396 100264294 100262286 18104628 120575770 123077891 123077892 123443268 123443273 107886776 107909291 125598498 125586979 110433916 8066641 8077561 102587645 102593834 102596954 102608976 102616731 102627978 100822941 100829288 100825985 107801604 107792179
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