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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1  CHLRE_04g215600v5  uncharacterized protein 
 ath-u.5  HOL1  HARMLESS TO OZONE LAYER 1 
 ath-u.5  HOL2  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5  HOL3  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 sly-u.5  101258085  thiocyanate methyltransferase 1 
 osa-u.5  4334753  probable thiol methyltransferase 2 
 osa-u.5  4340167  probable thiol methyltransferase 2 
 zma-u.5  100281381  S-adenosylmethionine-dependent methyltransferase/ methyltransferase/ thiopurine S-methyltransferase 
 bra-r.6  103866754  thiocyanate methyltransferase 1 
 bra-r.6  103866756  probable thiol methyltransferase 2 
 bra-r.6  103866115  probable thiol methyltransferase 2 
 vvi-u.5  100267940  probable thiol methyltransferase 2 
 vvi-u.5  100262791  probable thiol methyltransferase 2 
 ppo-u.5  7484604  probable thiol methyltransferase 2 
 tae-r.2  123114275  probable thiol methyltransferase 2 
 tae-r.2  123123760  probable thiol methyltransferase 2 
 tae-r.2  123149902  probable thiol methyltransferase 2 
 hvu-r.1  123395049  probable thiol methyltransferase 2 
 ghi-r.1  107890918  thiocyanate methyltransferase 1 
 ghi-r.1  107933601  probable thiol methyltransferase 2 
 bna-r.1  111215419  probable thiol methyltransferase 2 
 bna-r.1  106390210  thiocyanate methyltransferase 1 
 sbi-r.1  8069166  probable thiol methyltransferase 2 
 sot-r.1  102586501  thiocyanate methyltransferase 1 
 cit-r.1  102615986  probable thiol methyltransferase 2 
 bdi-r.1  100835924  probable thiol methyltransferase 2 
 nta-r.1  107793303  putative thiol methyltransferase 2 
 nta-r.1  107785116  putative thiol methyltransferase 2 

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Top 50 coexpressed genes to CHLRE_04g215600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_04g215600v5 (cre-r.1 coexpression data)

CoexMap"66053139"


creCHLRE_04g215600v5 | Entrez gene ID : 66053139
Species cre ath sly osa zma bra vvi ppo tae hvu ghi bna sbi sot cit bdi nta gma mtr
Paralog 1 3 1 2 1 3 2 1 3 1 2 2 1 1 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008757 [list] [network] S-adenosylmethionine-dependent methyltransferase activity  (132 genes)  IEA  
Protein XP_042925096.1 [sequence] [blastp]
XP_042925097.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  cysk_nucl 1  (predict for XP_042925096.1)
chlo 9,  mito 1,  cysk_nucl 1  (predict for XP_042925097.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042925096.1)
other 7  (predict for XP_042925097.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cre-r.1
for
CHLRE_04g215600v5


ath-u.5
for
HOL1


ath-u.5
for
HOL2


ath-u.5
for
HOL3


sly-u.5
for
101258085


osa-u.5
for
4334753


osa-u.5
for
4340167


zma-u.5
for
100281381


bra-r.6
for
103866754


bra-r.6
for
103866756


bra-r.6
for
103866115


vvi-u.5
for
100267940


vvi-u.5
for
100262791


ppo-u.5
for
7484604


tae-r.2
for
123114275


tae-r.2
for
123123760


tae-r.2
for
123149902


hvu-r.1
for
123395049


ghi-r.1
for
107890918


ghi-r.1
for
107933601


bna-r.1
for
111215419


bna-r.1
for
106390210


sbi-r.1
for
8069166


sot-r.1
for
102586501


cit-r.1
for
102615986


bdi-r.1
for
100835924


nta-r.1
for
107793303


nta-r.1
for
107785116



Ortholog ID: 4886
Species cre ath ath ath sly osa osa zma bra bra bra vvi vvi ppo tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_04g215600v5 HOL1 HOL2 HOL3 LOC101258085 LOC4334753 LOC4340167 LOC100281381 LOC103866754 LOC103866115 LOC103866114 LOC100267940 LOC100262791 LOC7484604 LOC123114275 LOC123123760 LOC123395049 LOC107890918 LOC107933601 LOC106391815 LOC106396712 LOC8069166 LOC102586501 LOC102615986 LOC100835924 LOC107793303 LOC107785116
Function* uncharacterized protein HARMLESS TO OZONE LAYER 1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein thiocyanate methyltransferase 1 probable thiol methyltransferase 2 probable thiol methyltransferase 2 S-adenosylmethionine-dependent methyltransferase/ methyltransferase/ thiopurine S-methyltransferase thiocyanate methyltransferase 1 probable thiol methyltransferase 2 probable thiocyanate methyltransferase 2 probable thiol methyltransferase 2 probable thiol methyltransferase 2 probable thiol methyltransferase 2 probable thiol methyltransferase 2 probable thiol methyltransferase 2 probable thiol methyltransferase 2 thiocyanate methyltransferase 1 probable thiol methyltransferase 2 probable thiocyanate methyltransferase 2 thiocyanate methyltransferase 1-like probable thiol methyltransferase 2 thiocyanate methyltransferase 1 probable thiol methyltransferase 2 probable thiol methyltransferase 2 putative thiol methyltransferase 2 putative thiol methyltransferase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
ath00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 2
osa01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 5
zma00640 Propanoate metabolism 3
zma00785 Lipoic acid metabolism 3
zma01210 2-Oxocarboxylic acid metabolism 3
zma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00480 Glutathione metabolism 3
tae00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 4
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03250 Viral life cycle - HIV-1 2
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66053139 818995 818996 818998 101258085 4334753 4340167 100281381 103866754 103866115 103866114 100267940 100262791 7484604 123114275 123123760 123395049 107890918 107933601 106391815 106396712 8069166 102586501 102615986 100835924 107793303 107785116
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