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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_04g217935v5   uncharacterized protein 
 ath-u.5   AT2G26780   ARM repeat superfamily protein 
 gma-u.5   100795917   proteasome adapter and scaffold protein ECM29 
 sly-u.5   101250081   uncharacterized LOC101250081 
 osa-u.5   4349719   uncharacterized LOC4349719 
 osa-u.5   4351436   uncharacterized LOC4351436 
 osa-u.5   4351501   uncharacterized LOC4351501 
 zma-u.5   103655792   proteasome adapter and scaffold protein ECM29 
 bra-r.6   103832625   proteasome adapter and scaffold protein ECM29 
 vvi-u.5   100244477   uncharacterized LOC100244477 
 ppo-u.5   7463881   uncharacterized LOC7463881 
 mtr-u.5   11423254   proteasome adapter and scaffold protein ECM29 
 tae-r.2   123120462   proteasome adapter and scaffold protein ECM29 
 tae-r.2   123111261   proteasome adapter and scaffold protein ECM29 
 tae-r.2   123103076   proteasome adapter and scaffold protein ECM29 
 hvu-r.1   123395525   proteasome adapter and scaffold protein ECM29 
 ghi-r.1   107891466   proteasome adapter and scaffold protein ECM29 
 ghi-r.1   121206032   proteasome adapter and scaffold protein ECM29-like 
 ghi-r.1   107889270   proteasome adapter and scaffold protein ECM29 
 bna-r.1   106443388   proteasome adapter and scaffold protein ECM29-like 
 bna-r.1   106453422   proteasome adapter and scaffold protein ECM29 
 sbi-r.1   8069273   proteasome-associated protein ECM29 homolog 
 sot-r.1   102596797   proteasome-associated protein ECM29 homolog 
 cit-r.1   102615291   uncharacterized LOC102615291 
 bdi-r.1   100838534   proteasome-associated protein ECM29 homolog 
 nta-r.1   107799855   uncharacterized LOC107799855 
 nta-r.1   107793918   uncharacterized LOC107793918 

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Top 50 coexpressed genes to CHLRE_04g217935v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_04g217935v5 (cre-r.1 coexpression data)

CoexMap"66053175"


creCHLRE_04g217935v5 | Entrez gene ID : 66053175    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 3 1 1 1 1 1 3 1 3 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043248 [list] [network] proteasome assembly  (11 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0060090 [list] [network] molecular adaptor activity  (122 genes)  IEA  
Protein XP_042925024.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  cyto 1,  extr 1,  vacu 1,  pero 1,  cyto_pero 1  (predict for XP_042925024.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_042925024.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_04g217935v5
ath-u.5
for
AT2G26780
gma-u.5
for
100795917
sly-u.5
for
101250081
osa-u.5
for
4349719
osa-u.5
for
4351436
osa-u.5
for
4351501
zma-u.5
for
103655792
bra-r.6
for
103832625
vvi-u.5
for
100244477
ppo-u.5
for
7463881
mtr-u.5
for
11423254
tae-r.2
for
123120462
tae-r.2
for
123111261
tae-r.2
for
123103076
hvu-r.1
for
123395525
ghi-r.1
for
107891466
ghi-r.1
for
121206032
ghi-r.1
for
107889270
bna-r.1
for
106443388
bna-r.1
for
106453422
sbi-r.1
for
8069273
sot-r.1
for
102596797
cit-r.1
for
102615291
bdi-r.1
for
100838534
nta-r.1
for
107799855
nta-r.1
for
107793918


Ortholog ID: 8890
Species cre ath gma sly osa osa osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_04g217935v5 AT2G26780 LOC100795917 LOC101250081 LOC4349719 LOC4351436 LOC4351501 LOC103655792 LOC103832625 LOC100244477 LOC7463881 LOC11423254 LOC123120462 LOC123111261 LOC123103076 LOC123395525 LOC107891466 LOC121206032 LOC107889270 LOC106443388 LOC106453422 LOC8069273 LOC102596797 LOC102615291 LOC100838534 LOC107799855 LOC107793918
Function* uncharacterized protein ARM repeat superfamily protein proteasome adapter and scaffold protein ECM29 uncharacterized LOC101250081 uncharacterized LOC4349719 uncharacterized LOC4351436 uncharacterized LOC4351501 proteasome adapter and scaffold protein ECM29 proteasome adapter and scaffold protein ECM29 uncharacterized LOC100244477 uncharacterized LOC7463881 proteasome adapter and scaffold protein ECM29 proteasome adapter and scaffold protein ECM29 proteasome adapter and scaffold protein ECM29 proteasome adapter and scaffold protein ECM29 proteasome adapter and scaffold protein ECM29 proteasome adapter and scaffold protein ECM29 proteasome adapter and scaffold protein ECM29-like proteasome adapter and scaffold protein ECM29 proteasome adapter and scaffold protein ECM29-like proteasome adapter and scaffold protein ECM29 proteasome-associated protein ECM29 homolog proteasome-associated protein ECM29 homolog uncharacterized LOC102615291 proteasome-associated protein ECM29 homolog uncharacterized LOC107799855 uncharacterized LOC107793918
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 3
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 6
bra03050 Proteasome 2
bra03250 Viral life cycle - HIV-1 2
bra03272 Virion - Hepatitis viruses 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03050 Proteasome 3
tae00511 Other glycan degradation 2
tae00600 Sphingolipid metabolism 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03050 Proteasome 3
tae00511 Other glycan degradation 2
tae00600 Sphingolipid metabolism 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 5
bna04120 Ubiquitin mediated proteolysis 5
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna03020 RNA polymerase 5
bna03420 Nucleotide excision repair 5
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66053175 817219 100795917 101250081 4349719 4351436 4351501 103655792 103832625 100244477 7463881 11423254 123120462 123111261 123103076 123395525 107891466 121206032 107889270 106443388 106453422 8069273 102596797 102615291 100838534 107799855 107793918
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