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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g425200v5   uncharacterized protein 
 ath-u.5   FCLY   farnesylcysteine lyase 
 gma-u.5   100819877   farnesylcysteine lyase 
 sly-u.5   101250000   farnesylcysteine lyase 
 zma-u.5   103642227   farnesylcysteine lyase 
 bra-r.6   103873809   farnesylcysteine lyase 
 vvi-u.5   100268071   farnesylcysteine lyase 
 ppo-u.5   18100924   farnesylcysteine lyase 
 ppo-u.5   7466760   farnesylcysteine lyase 
 mtr-u.5   25489862   farnesylcysteine lyase 
 tae-r.2   123047537   farnesylcysteine lyase 
 tae-r.2   123055345   farnesylcysteine lyase 
 hvu-r.1   123428509   farnesylcysteine lyase 
 ghi-r.1   107945423   farnesylcysteine lyase 
 ghi-r.1   107925476   farnesylcysteine lyase 
 bna-r.1   106347946   farnesylcysteine lyase 
 bna-r.1   106348069   farnesylcysteine lyase 
 sbi-r.1   8064304   farnesylcysteine lyase 
 sot-r.1   102583614   farnesylcysteine lyase 
 cit-r.1   102619140   farnesylcysteine lyase 
 bdi-r.1   100821994   farnesylcysteine lyase 
 nta-r.1   107826766   farnesylcysteine lyase 
 nta-r.1   107773308   farnesylcysteine lyase 

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Top 50 coexpressed genes to CHLRE_10g425200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g425200v5 (cre-r.1 coexpression data)

CoexMap"66054965"


creCHLRE_10g425200v5 | Entrez gene ID : 66054965    
Species cre ath gma sly zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta osa
Paralog 1 1 1 1 1 1 1 2 1 2 1 2 2 1 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030327 [list] [network] prenylated protein catabolic process  (1 genes)  IEA  
GO:0030328 [list] [network] prenylcysteine catabolic process  (1 genes)  IEA  
GO CC
GO MF
GO:0001735 [list] [network] prenylcysteine oxidase activity  (1 genes)  IEA  
Protein XP_042919935.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  nucl_plas 3,  cyto 2,  mito 2,  chlo 1,  plas 1,  golg 1  (predict for XP_042919935.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042919935.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g425200v5
ath-u.5
for
FCLY
gma-u.5
for
100819877
sly-u.5
for
101250000
zma-u.5
for
103642227
bra-r.6
for
103873809
vvi-u.5
for
100268071
ppo-u.5
for
18100924
ppo-u.5
for
7466760
mtr-u.5
for
25489862
tae-r.2
for
123047537
tae-r.2
for
123055345
hvu-r.1
for
123428509
ghi-r.1
for
107945423
ghi-r.1
for
107925476
bna-r.1
for
106347946
bna-r.1
for
106348069
sbi-r.1
for
8064304
sot-r.1
for
102583614
cit-r.1
for
102619140
bdi-r.1
for
100821994
nta-r.1
for
107826766
nta-r.1
for
107773308


Ortholog ID: 9191
Species cre ath gma sly zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_10g425200v5 FCLY LOC100819877 LOC101250000 LOC103642227 LOC103873809 LOC100268071 LOC18100924 LOC7466760 LOC25489862 LOC123047537 LOC123191158 LOC123428509 LOC107945423 LOC107925476 LOC106347946 LOC106348069 LOC8064304 LOC102583614 LOC102619140 LOC100821994 LOC107826766 LOC107773308
Function* uncharacterized protein farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase farnesylcysteine lyase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04145 Phagosome 5
gma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sly00940 Phenylpropanoid biosynthesis 2
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00100 Steroid biosynthesis 3
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
ppo04142 Lysosome 2
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00071 Fatty acid degradation 2
ppo00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 4
ppo04142 Lysosome 3
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna03050 Proteasome 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01210 2-Oxocarboxylic acid metabolism 4
sot01230 Biosynthesis of amino acids 4
sot00190 Oxidative phosphorylation 3
sot00220 Arginine biosynthesis 2
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
cit04144 Endocytosis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00020 Citrate cycle (TCA cycle) 4
bdi01230 Biosynthesis of amino acids 4
bdi00010 Glycolysis / Gluconeogenesis 3
bdi00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta00220 Arginine biosynthesis 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta00220 Arginine biosynthesis 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
nta00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66054965 836512 100819877 101250000 103642227 103873809 100268071 18100924 7466760 25489862 123047537 123191158 123428509 107945423 107925476 106347946 106348069 8064304 102583614 102619140 100821994 107826766 107773308
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