ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_10g459000v5	uncharacterized protein
ath-u.5	AT4G12130	Glycine cleavage T-protein family
gma-u.5	100804156	putative transferase At4g12130, mitochondrial
sly-u.5	101265463	putative transferase At4g12130, mitochondrial
osa-u.5	4340033	putative transferase At4g12130, mitochondrial
zma-u.5	100280888	aminomethyltransferase
bra-r.6	103858621	putative transferase At4g12130, mitochondrial
bra-r.6	103839903	putative transferase At4g12130, mitochondrial
vvi-u.5	104882013	putative transferase At4g12130, mitochondrial
ppo-u.5	18094403	putative transferase At4g12130, mitochondrial
mtr-u.5	25489580	putative transferase At4g12130, mitochondrial
tae-r.2	123167415	putative transferase At4g12130, mitochondrial
tae-r.2	123087855	putative transferase At4g12130, mitochondrial
hvu-r.1	123410617	putative transferase At4g12130, mitochondrial
ghi-r.1	121224325	putative transferase At4g12130, mitochondrial
ghi-r.1	107946955	putative transferase At4g12130, mitochondrial
bna-r.1	106442047	putative transferase At4g12130, mitochondrial
bna-r.1	106416614	putative transferase At4g12130, mitochondrial
bna-r.1	106405254	putative transferase At4g12130, mitochondrial
sbi-r.1	8069078	putative transferase At4g12130, mitochondrial
sot-r.1	102580480	putative transferase At4g12130, mitochondrial
cit-r.1	102630145	putative transferase At4g12130, mitochondrial
bdi-r.1	100830689	putative transferase At4g12130, mitochondrial
nta-r.1	107768365	putative transferase At4g12130, mitochondrial
nta-r.1	107781631	putative transferase At4g12130, mitochondrial
nta-r.1	107786769	putative transferase At4g12130, mitochondrial

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005759 [list] [network] mitochondrial matrix

(126 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(1927 genes)

IEA

Protein

XP_042920515.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 3, chlo_mito 3

(predict for XP_042920515.1)

Subcellular
localization
TargetP

other 8

(predict for XP_042920515.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_10g459000v5	ath-u.5 for AT4G12130	gma-u.5 for 100804156	sly-u.5 for 101265463	osa-u.5 for 4340033	zma-u.5 for 100280888	bra-r.6 for 103858621	bra-r.6 for 103839903	vvi-u.5 for 104882013	ppo-u.5 for 18094403	mtr-u.5 for 25489580	tae-r.2 for 123167415	tae-r.2 for 123087855	hvu-r.1 for 123410617	ghi-r.1 for 121224325	ghi-r.1 for 107946955	bna-r.1 for 106442047	bna-r.1 for 106416614	bna-r.1 for 106405254	sbi-r.1 for 8069078	sot-r.1 for 102580480	cit-r.1 for 102630145	bdi-r.1 for 100830689	nta-r.1 for 107768365	nta-r.1 for 107781631	nta-r.1 for 107786769

Ortholog

Ortholog ID: 7649

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Glycine cleavage T-protein family

putative transferase At4g12130, mitochondrial

aminomethyltransferase

putative transferase At4g12130, mitochondrial

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00061	Fatty acid biosynthesis	2
ath01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
sly01230	Biosynthesis of amino acids	5
sly01200	Carbon metabolism	2
sly00010	Glycolysis / Gluconeogenesis	2
sly00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	3
bra01200	Carbon metabolism	3
bra00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	4
ppo03040	Spliceosome	3
ppo04141	Protein processing in endoplasmic reticulum	3
ppo04144	Endocytosis	2
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00790	Folate biosynthesis	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00790	Folate biosynthesis	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	3
hvu00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi00220	Arginine biosynthesis	2
ghi00250	Alanine, aspartate and glutamate metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi00220	Arginine biosynthesis	2
ghi00250	Alanine, aspartate and glutamate metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna01240	Biosynthesis of cofactors	4
bna00290	Valine, leucine and isoleucine biosynthesis	4
bna00660	C5-Branched dibasic acid metabolism	4
bna01210	2-Oxocarboxylic acid metabolism	4
bna01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	5
sot00230	Purine metabolism	2
sot00250	Alanine, aspartate and glutamate metabolism	2
sot01232	Nucleotide metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00270	Cysteine and methionine metabolism	2
cit00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01240	Biosynthesis of cofactors	3
nta00260	Glycine, serine and threonine metabolism	2
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2
nta00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00260	Glycine, serine and threonine metabolism	2
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2
nta00750	Vitamin B6 metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01240	Biosynthesis of cofactors	3
nta00260	Glycine, serine and threonine metabolism	2
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2
nta00750	Vitamin B6 metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

66055135

826821

100804156

101265463

4340033

100280888

103858621

103839903

104882013

18094403

25489580

123167415

123087855

123410617

121224325

107946955

106442047

106388574

106367033

8069078

102580480

102630145

100830689

107768365

107781631

107786769

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_10g459000v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_10g459000v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	1	1	1	1	2	1	1	1	2	1	2	3	1	1	1	1	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_10g459000v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_10g459000v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**