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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g463700v5   uncharacterized protein 
 ath-u.5   AT5G17070   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 gma-u.5   100803269   serine/threonine-protein phosphatase 4 regulatory subunit 2-like 
 gma-u.5   100527622   uncharacterized LOC100527622 
 sly-u.5   101262493   uncharacterized LOC101262493 
 osa-u.5   4340824   uncharacterized LOC4340824 
 zma-u.5   100216692   uncharacterized LOC100216692 
 bra-r.6   103851081   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 vvi-u.5   100242589   uncharacterized LOC100242589 
 ppo-u.5   18108308   uncharacterized LOC18108308 
 mtr-u.5   11441662   serine/threonine-protein phosphatase 4 regulatory subunit 2-A 
 tae-r.2   123156649   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 tae-r.2   123150437   serine/threonine-protein phosphatase 4 regulatory subunit 2-A 
 tae-r.2   123164664   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 hvu-r.1   123407290   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 ghi-r.1   107955772   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 ghi-r.1   107954829   transcription factor GTE8 
 bna-r.1   106354434   serine/threonine-protein phosphatase 4 regulatory subunit 2-like 
 bna-r.1   125575264   serine/threonine-protein phosphatase 4 regulatory subunit 2-like 
 sbi-r.1   8076434   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 sot-r.1   102594659   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 cit-r.1   102608047   uncharacterized LOC102608047 
 bdi-r.1   100821792   serine/threonine-protein phosphatase 4 regulatory subunit 2 
 nta-r.1   107776329   uncharacterized LOC107776329 
 nta-r.1   107769224   uncharacterized LOC107769224 

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Top 50 coexpressed genes to CHLRE_10g463700v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g463700v5 (cre-r.1 coexpression data)

CoexMap"66055171"


creCHLRE_10g463700v5 | Entrez gene ID : 66055171    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006470 [list] [network] protein dephosphorylation  (54 genes)  IEA  
GO CC
GO:0030289 [list] [network] protein phosphatase 4 complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0019888 [list] [network] protein phosphatase regulator activity  (13 genes)  IEA  
Protein XP_042920601.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_042920601.1)
Subcellular
localization
TargetP
other 7,  chlo 6  (predict for XP_042920601.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g463700v5
ath-u.5
for
AT5G17070
gma-u.5
for
100803269
gma-u.5
for
100527622
sly-u.5
for
101262493
osa-u.5
for
4340824
zma-u.5
for
100216692
bra-r.6
for
103851081
vvi-u.5
for
100242589
ppo-u.5
for
18108308
mtr-u.5
for
11441662
tae-r.2
for
123156649
tae-r.2
for
123150437
tae-r.2
for
123164664
hvu-r.1
for
123407290
ghi-r.1
for
107955772
ghi-r.1
for
107954829
bna-r.1
for
106354434
bna-r.1
for
125575264
sbi-r.1
for
8076434
sot-r.1
for
102594659
cit-r.1
for
102608047
bdi-r.1
for
100821792
nta-r.1
for
107776329
nta-r.1
for
107769224


Ortholog ID: 9669
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_10g463700v5 AT5G17070 LOC100803269 LOC100527622 LOC101262493 LOC4340824 LOC100216692 LOC103851081 LOC100242589 LOC18108308 LOC11441662 LOC123156649 LOC123150437 LOC123164664 LOC123407290 LOC107955772 LOC107954829 LOC106354434 LOC125575264 LOC8076434 LOC102594659 LOC102608047 LOC100821792 LOC107776329 LOC107769224
Function* uncharacterized protein serine/threonine-protein phosphatase 4 regulatory subunit-like protein serine/threonine-protein phosphatase 4 regulatory subunit 2-like uncharacterized LOC100527622 uncharacterized LOC101262493 uncharacterized LOC4340824 uncharacterized LOC100216692 serine/threonine-protein phosphatase 4 regulatory subunit 2 uncharacterized LOC100242589 uncharacterized LOC18108308 serine/threonine-protein phosphatase 4 regulatory subunit 2-A serine/threonine-protein phosphatase 4 regulatory subunit 2 serine/threonine-protein phosphatase 4 regulatory subunit 2-A serine/threonine-protein phosphatase 4 regulatory subunit 2 serine/threonine-protein phosphatase 4 regulatory subunit 2 serine/threonine-protein phosphatase 4 regulatory subunit 2 transcription factor GTE8 serine/threonine-protein phosphatase 4 regulatory subunit 2-like serine/threonine-protein phosphatase 4 regulatory subunit 2-like serine/threonine-protein phosphatase 4 regulatory subunit 2 serine/threonine-protein phosphatase 4 regulatory subunit 2 uncharacterized LOC102608047 serine/threonine-protein phosphatase 4 regulatory subunit 2 uncharacterized LOC107776329 uncharacterized LOC107769224
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
cre03008 Ribosome biogenesis in eukaryotes 2
cre04712 Circadian rhythm - plant 2
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00770 Pantothenate and CoA biosynthesis 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
bna04814 Motor proteins 2
bna00770 Pantothenate and CoA biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
bna04814 Motor proteins 2
bna00770 Pantothenate and CoA biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit00230 Purine metabolism 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03050 Proteasome 2
nta03040 Spliceosome 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03040 Spliceosome 3
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66055171 831570 100803269 100527622 101262493 4340824 100216692 103851081 100242589 18108308 11441662 123156649 123150437 123164664 123407290 107955772 107954829 106354434 125575264 8076434 102594659 102608047 100821792 107776329 107769224
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