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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g490250v5   uncharacterized protein 
 ath-u.5   TTN1   ARM repeat superfamily protein 
 gma-u.5   100814866   tubulin-folding cofactor D 
 gma-u.5   100792992   tubulin-folding cofactor D 
 sly-u.5   101248517   tubulin-folding cofactor D 
 osa-u.5   4349076   tubulin-folding cofactor D 
 zma-u.5   100273796   Tubulin-folding cofactor D 
 bra-r.6   103862865   tubulin-folding cofactor D 
 vvi-u.5   100259210   tubulin-folding cofactor D 
 ppo-u.5   7488889   tubulin-folding cofactor D 
 mtr-u.5   25485580   tubulin-folding cofactor D 
 tae-r.2   123181313   tubulin-folding cofactor D 
 tae-r.2   123124592   tubulin-folding cofactor D 
 tae-r.2   123048753   tubulin-folding cofactor D 
 hvu-r.1   123434543   tubulin-folding cofactor D 
 ghi-r.1   107944770   tubulin-folding cofactor D 
 ghi-r.1   107904016   tubulin-folding cofactor D 
 bna-r.1   106445049   tubulin-folding cofactor D-like 
 bna-r.1   111215157   tubulin-folding cofactor D-like 
 sbi-r.1   8065185   tubulin-folding cofactor D 
 sot-r.1   102603166   tubulin-folding cofactor D 
 cit-r.1   102616941   tubulin-folding cofactor D 
 bdi-r.1   100838006   tubulin-folding cofactor D 
 nta-r.1   107770150   tubulin-folding cofactor D 
 nta-r.1   107787597   tubulin-folding cofactor D 
 nta-r.1   107764801   tubulin-folding cofactor D-like 

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Top 50 coexpressed genes to CHLRE_12g490250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g490250v5 (cre-r.1 coexpression data)

CoexMap"66055419"


creCHLRE_12g490250v5 | Entrez gene ID : 66055419    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 3
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007023 [list] [network] post-chaperonin tubulin folding pathway  (4 genes)  IEA  
GO:0007021 [list] [network] tubulin complex assembly  (5 genes)  IEA  
GO:0000226 [list] [network] microtubule cytoskeleton organization  (174 genes)  IEA  
GO CC
GO MF
GO:0048487 [list] [network] beta-tubulin binding  (4 genes)  IEA  
GO:0005096 [list] [network] GTPase activator activity  (37 genes)  IEA  
Protein XP_042918029.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  chlo 1,  cyto 1,  E.R. 1,  pero 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_042918029.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042918029.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g490250v5
ath-u.5
for
TTN1
gma-u.5
for
100814866
gma-u.5
for
100792992
sly-u.5
for
101248517
osa-u.5
for
4349076
zma-u.5
for
100273796
bra-r.6
for
103862865
vvi-u.5
for
100259210
ppo-u.5
for
7488889
mtr-u.5
for
25485580
tae-r.2
for
123181313
tae-r.2
for
123124592
tae-r.2
for
123048753
hvu-r.1
for
123434543
ghi-r.1
for
107944770
ghi-r.1
for
107904016
bna-r.1
for
106445049
bna-r.1
for
111215157
sbi-r.1
for
8065185
sot-r.1
for
102603166
cit-r.1
for
102616941
bdi-r.1
for
100838006
nta-r.1
for
107770150
nta-r.1
for
107787597
nta-r.1
for
107764801


Ortholog ID: 9548
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_12g490250v5 TTN1 LOC100814866 LOC100792992 LOC101248517 LOC4349076 LOC100273796 LOC103862865 LOC100259210 LOC7488889 LOC25485580 LOC123181313 LOC123124592 LOC123048753 LOC123434543 LOC107944770 LOC107904016 LOC106445049 LOC111215157 LOC8065185 LOC102603166 LOC102616941 LOC100838006 LOC107770150 LOC107787597 LOC107764801
Function* uncharacterized protein ARM repeat superfamily protein tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D Tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D-like tubulin-folding cofactor D-like tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D tubulin-folding cofactor D-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 4
zma04144 Endocytosis 4
zma05100 Bacterial invasion of epithelial cells 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 10
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi04142 Lysosome 2
sbi04144 Endocytosis 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 4
sot03020 RNA polymerase 3
sot03008 Ribosome biogenesis in eukaryotes 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 4
bdi04144 Endocytosis 2
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta04016 MAPK signaling pathway - plant 2
nta03060 Protein export 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04120 Ubiquitin mediated proteolysis 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66055419 825245 100814866 100792992 101248517 4349076 100273796 103862865 100259210 7488889 25485580 123181313 123124592 123048753 123434543 107944770 107904016 106445049 111215157 8065185 102603166 102616941 100838006 107770150 107787597 107764801
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