ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_12g516333v5	uncharacterized protein
ath-u.5	AT1G53800	muscle M-line assembly protein
gma-u.5	100812708	uncharacterized LOC100812708
gma-u.5	100306569	uncharacterized LOC100306569
sly-u.5	101243687	uncharacterized LOC101243687
osa-u.5	4348255	uncharacterized LOC4348255
zma-u.5	100191876	uncharacterized LOC100191876
bra-r.6	103871109	uncharacterized LOC103871109
bra-r.6	103848509	uncharacterized LOC103848509
vvi-u.5	100241217	uncharacterized LOC100241217
ppo-u.5	18094662	uncharacterized LOC18094662
ppo-u.5	7471609	uncharacterized LOC7471609
mtr-u.5	25499752	uncharacterized LOC25499752
tae-r.2	123042354	uncharacterized LOC123042354
tae-r.2	123118427	uncharacterized LOC123118427
tae-r.2	123180894	uncharacterized LOC123180894
hvu-r.1	123428665	uncharacterized LOC123428665
ghi-r.1	107958340	uncharacterized LOC107958340
ghi-r.1	107913830	uncharacterized LOC107913830
ghi-r.1	107906029	protein SON
bna-r.1	125597399	uncharacterized LOC125597399
bna-r.1	125601679	uncharacterized LOC125601679
bna-r.1	106418665	uncharacterized LOC106418665
sbi-r.1	8070318	uncharacterized LOC8070318
sot-r.1	102583814	uncharacterized LOC102583814
cit-r.1	102617519	uncharacterized LOC102617519
bdi-r.1	100822972	uncharacterized LOC100822972
nta-r.1	107790700	uncharacterized LOC107790700
nta-r.1	107788958	uncharacterized LOC107788958

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003677 [list] [network] DNA binding

(670 genes)

IEA

Protein

XP_042918401.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 4

(predict for XP_042918401.1)

Subcellular
localization
TargetP

mito 7, chlo 4

(predict for XP_042918401.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_12g516333v5	ath-u.5 for AT1G53800	gma-u.5 for 100812708	gma-u.5 for 100306569	sly-u.5 for 101243687	osa-u.5 for 4348255	zma-u.5 for 100191876	bra-r.6 for 103871109	bra-r.6 for 103848509	vvi-u.5 for 100241217	ppo-u.5 for 18094662	ppo-u.5 for 7471609	mtr-u.5 for 25499752	tae-r.2 for 123042354	tae-r.2 for 123118427	tae-r.2 for 123180894	hvu-r.1 for 123428665	ghi-r.1 for 107958340	ghi-r.1 for 107913830	ghi-r.1 for 107906029	bna-r.1 for 125597399	bna-r.1 for 125601679	bna-r.1 for 106418665	sbi-r.1 for 8070318	sot-r.1 for 102583814	cit-r.1 for 102617519	bdi-r.1 for 100822972	nta-r.1 for 107790700	nta-r.1 for 107788958

Ortholog

Ortholog ID: 7075

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

muscle M-line assembly protein

uncharacterized LOC100812708

uncharacterized LOC100306569

uncharacterized LOC101243687

uncharacterized LOC4348255

uncharacterized LOC100191876

uncharacterized LOC103871109

uncharacterized LOC103848509

uncharacterized LOC100241217

uncharacterized LOC18094662

uncharacterized LOC7471609

uncharacterized LOC25499752

uncharacterized LOC123042354

uncharacterized LOC123118427

uncharacterized LOC123180894

uncharacterized LOC123428665

uncharacterized LOC107958340

uncharacterized LOC107913830

uncharacterized LOC107897467

uncharacterized LOC125601679

uncharacterized LOC106367651

uncharacterized LOC106345804

uncharacterized LOC8070318

uncharacterized LOC102583814

uncharacterized LOC102617519

uncharacterized LOC100822972

uncharacterized LOC107790700

uncharacterized LOC107788958

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00230	Purine metabolism	2
bra00240	Pyrimidine metabolism	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4
mtr03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	2
tae00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	2
tae00710	Carbon fixation by Calvin cycle	2
tae01200	Carbon metabolism	2
tae01230	Biosynthesis of amino acids	2
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae00541	Biosynthesis of various nucleotide sugars	3
tae00561	Glycerolipid metabolism	3
tae00566	Sulfoquinovose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	2
bna04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	2
bna04070	Phosphatidylinositol signaling system	2

Expression

Expression pattern

Entrez Gene ID^*

66055561

841817

100812708

100306569

101243687

4348255

100191876

103871109

103848509

100241217

18094662

7471609

25499752

123042354

123118427

123180894

123428665

107958340

107913830

107897467

125601679

106367651

106345804

8070318

102583814

102617519

100822972

107790700

107788958

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_12g516333v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_12g516333v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	1	2	1	2	1	3	1	3	3	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_12g516333v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_12g516333v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**