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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g544400v5   uncharacterized protein 
 ath-u.5   AT3G15220   Protein kinase superfamily protein 
 ath-u.5   ATMAP4K ALPHA1   Protein kinase superfamily protein 
 gma-u.5   100815042   germinal center kinase 1 
 gma-u.5   100814188   germinal center kinase 1 
 gma-u.5   100786501   germinal center kinase 1 
 sly-u.5   101259061   serine/threonine-protein kinase sid1 
 osa-u.5   4343333   uncharacterized LOC4343333 
 zma-u.5   542105   GCK-like kinase MIK 
 bra-r.6   103869947   germinal center kinase 1 
 bra-r.6   103868451   germinal center kinase 1 
 vvi-u.5   100258981   uncharacterized LOC100258981 
 ppo-u.5   18103373   uncharacterized LOC18103373 
 ppo-u.5   18095556   uncharacterized LOC18095556 
 mtr-u.5   25487306   germinal center kinase 1 
 tae-r.2   123044723   serine/threonine-protein kinase svkA 
 tae-r.2   123052582   serine/threonine-protein kinase svkA 
 tae-r.2   123188534   serine/threonine-protein kinase svkA 
 hvu-r.1   123425948   serine/threonine-protein kinase 24-like 
 ghi-r.1   107952087   serine/threonine-protein kinase 26 
 ghi-r.1   107948762   serine/threonine-protein kinase 24 
 ghi-r.1   107917937   germinal center kinase 1 
 bna-r.1   111212485   germinal center kinase 1-like 
 bna-r.1   125574775   germinal center kinase 1-like 
 bna-r.1   106402110   germinal center kinase 1 
 sbi-r.1   8080727   serine/threonine-protein kinase 25 
 sot-r.1   102595112   serine/threonine-protein kinase sid1 
 bdi-r.1   100831012   serine/threonine-protein kinase svkA 
 nta-r.1   107831610   uncharacterized LOC107831610 
 nta-r.1   107831895   uncharacterized LOC107831895 

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Top 50 coexpressed genes to CHLRE_12g544400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g544400v5 (cre-r.1 coexpression data)

CoexMap"66055748"


creCHLRE_12g544400v5 | Entrez gene ID : 66055748    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot bdi nta cit
Paralog 1 2 3 1 1 1 2 1 2 1 3 1 3 3 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006468 [list] [network] protein phosphorylation  (662 genes)  IEA  
GO CC
GO MF
GO:0004672 [list] [network] protein kinase activity  (671 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042919133.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  nucl_plas 3  (predict for XP_042919133.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_042919133.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g544400v5
ath-u.5
for
AT3G15220
ath-u.5
for
ATMAP4K ALPHA1
gma-u.5
for
100815042
gma-u.5
for
100814188
gma-u.5
for
100786501
sly-u.5
for
101259061
osa-u.5
for
4343333
zma-u.5
for
542105
bra-r.6
for
103869947
bra-r.6
for
103868451
vvi-u.5
for
100258981
ppo-u.5
for
18103373
ppo-u.5
for
18095556
mtr-u.5
for
25487306
tae-r.2
for
123044723
tae-r.2
for
123052582
tae-r.2
for
123188534
hvu-r.1
for
123425948
ghi-r.1
for
107952087
ghi-r.1
for
107948762
ghi-r.1
for
107917937
bna-r.1
for
111212485
bna-r.1
for
125574775
bna-r.1
for
106402110
sbi-r.1
for
8080727
sot-r.1
for
102595112
bdi-r.1
for
100831012
nta-r.1
for
107831610
nta-r.1
for
107831895


Ortholog ID: 5994
Species cre ath ath gma gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot bdi nta nta
Symbol CHLRE_12g544400v5 AT3G15220 ATMAP4K ALPHA1 LOC100815042 LOC100814188 LOC100786501 LOC101259061 LOC4343333 LOC542105 LOC103869947 LOC103868451 LOC100258981 LOC18103373 LOC18095556 LOC25487306 LOC123044723 LOC123052582 LOC123188534 LOC123425948 LOC107952087 LOC107917937 LOC107917758 LOC125574775 LOC106402110 LOC106406711 LOC8080727 LOC102595112 LOC100831012 LOC107831610 LOC107831895
Function* uncharacterized protein Protein kinase superfamily protein Protein kinase superfamily protein germinal center kinase 1 germinal center kinase 1 germinal center kinase 1 serine/threonine-protein kinase sid1 uncharacterized LOC4343333 GCK-like kinase MIK germinal center kinase 1 germinal center kinase 1 uncharacterized LOC100258981 uncharacterized LOC18103373 uncharacterized LOC18095556 germinal center kinase 1 serine/threonine-protein kinase svkA serine/threonine-protein kinase svkA serine/threonine-protein kinase svkA serine/threonine-protein kinase 24-like serine/threonine-protein kinase 26 germinal center kinase 1 germinal center kinase 1 germinal center kinase 1-like germinal center kinase 1 serine/threonine-protein kinase 3-like serine/threonine-protein kinase 25 serine/threonine-protein kinase sid1 serine/threonine-protein kinase svkA uncharacterized LOC107831610 uncharacterized LOC107831895
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta04144 Endocytosis 4
nta05100 Bacterial invasion of epithelial cells 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta04144 Endocytosis 3
nta05100 Bacterial invasion of epithelial cells 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66055748 820753 841750 100815042 100814188 100786501 101259061 4343333 542105 103869947 103868451 100258981 18103373 18095556 25487306 123044723 123052582 123188534 123425948 107952087 107917937 107917758 125574775 106402110 106406711 8080727 102595112 100831012 107831610 107831895
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