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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g556802v5   uncharacterized protein 
 cre-r.1   CHLRE_02g113652v5   uncharacterized protein 
 cre-r.1   CHLRE_12g556750v5   uncharacterized protein 
 cre-r.1   CHLRE_09g398252v5   uncharacterized protein 
 ath-u.5   AT2G37540   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-u.5   AT5G50130   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-u.5   AT5G02540   NAD(P)-binding Rossmann-fold superfamily protein 
 gma-u.5   100794358   short-chain dehydrogenase TIC 32, chloroplastic 
 gma-u.5   100796920   short-chain dehydrogenases/reductase family protein 
 gma-u.5   100795299   retinol dehydrogenase 12-like 
 sly-u.5   101246319   short-chain dehydrogenase TIC 32, chloroplastic-like 
 sly-u.5   101255321   short-chain dehydrogenase TIC 32, chloroplastic 
 osa-u.5   4349944   short-chain dehydrogenase TIC 32, chloroplastic 
 osa-u.5   4349945   short-chain dehydrogenase TIC 32, chloroplastic 
 osa-u.5   4335398   short-chain dehydrogenase TIC 32, chloroplastic 
 zma-u.5   100272665   Short-chain dehydrogenase TIC 32 chloroplastic 
 zma-u.5   100500950   retinol dehydrogenase 11 
 zma-u.5   103641540   short-chain dehydrogenase TIC 32, chloroplastic 
 bra-r.6   103843875   short-chain dehydrogenase TIC 32 A, chloroplastic 
 bra-r.6   103867188   short-chain dehydrogenase TIC 32 B, chloroplastic 
 bra-r.6   103865606   short-chain dehydrogenase TIC 32 B, chloroplastic 
 vvi-u.5   100242214   short-chain dehydrogenase TIC 32, chloroplastic 
 vvi-u.5   100246509   short-chain dehydrogenase TIC 32 B, chloroplastic 
 vvi-u.5   100247484   short-chain dehydrogenase TIC 32, chloroplastic 
 ppo-u.5   7457761   short-chain dehydrogenase TIC 32 B, chloroplastic 
 ppo-u.5   7458067   short-chain dehydrogenase TIC 32 B, chloroplastic 
 ppo-u.5   7465871   short-chain dehydrogenase TIC 32, chloroplastic 
 mtr-u.5   25502056   short-chain dehydrogenase TIC 32, chloroplastic 
 mtr-u.5   25496527   short-chain dehydrogenase TIC 32, chloroplastic 
 mtr-u.5   25496525   short-chain dehydrogenase TIC 32, chloroplastic 
 tae-r.2   123060169   short-chain dehydrogenase TIC 32 B, chloroplastic 
 hvu-r.1   123446804   short-chain dehydrogenase TIC 32, chloroplastic 
 hvu-r.1   123396478   short-chain dehydrogenase TIC 32 B, chloroplastic-like 
 hvu-r.1   123442711   short-chain dehydrogenase TIC 32 B, chloroplastic-like 
 ghi-r.1   107948830   short-chain dehydrogenase TIC 32 B, chloroplastic 
 ghi-r.1   107933597   short-chain dehydrogenase TIC 32 B, chloroplastic 
 ghi-r.1   107963786   short-chain dehydrogenase TIC 32, chloroplastic 
 bna-r.1   106402344   short-chain dehydrogenase TIC 32 B, chloroplastic-like 
 bna-r.1   106389529   short-chain dehydrogenase TIC 32 A, chloroplastic-like 
 bna-r.1   106377123   short-chain dehydrogenase TIC 32 B, chloroplastic-like 
 sbi-r.1   8062560   uncharacterized LOC8062560 
 sbi-r.1   8073299   short-chain dehydrogenase TIC 32, chloroplastic 
 sbi-r.1   8072772   short-chain dehydrogenase TIC 32, chloroplastic 
 sot-r.1   102578900   short-chain dehydrogenase TIC 32, chloroplastic-like 
 cit-r.1   102611079   short-chain dehydrogenase TIC 32 B, chloroplastic 
 cit-r.1   102620776   short-chain dehydrogenase TIC 32, chloroplastic 
 cit-r.1   102621246   short-chain dehydrogenase TIC 32, chloroplastic-like 
 bdi-r.1   100827514   uncharacterized LOC100827514 
 bdi-r.1   100830870   short-chain dehydrogenase TIC 32, chloroplastic 
 bdi-r.1   100836169   short-chain dehydrogenase TIC 32, chloroplastic 
 nta-r.1   107778526   short-chain dehydrogenase TIC 32, chloroplastic 
 nta-r.1   107829977   short-chain dehydrogenase TIC 32 B, chloroplastic 
 nta-r.1   107825842   short-chain dehydrogenase TIC 32, chloroplastic 

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Top 50 coexpressed genes to CHLRE_12g556802v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g556802v5 (cre-r.1 coexpression data)

CoexMap"66055844"


creCHLRE_12g556802v5 | Entrez gene ID : 66055844    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 4 3 3 2 3 3 3 3 3 3 1 3 3 3 3 1 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_042918899.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 3  (predict for XP_042918899.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_042918899.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g556802v5
cre-r.1
for
CHLRE_02g113652v5
cre-r.1
for
CHLRE_12g556750v5
cre-r.1
for
CHLRE_09g398252v5
ath-u.5
for
AT2G37540
ath-u.5
for
AT5G50130
ath-u.5
for
AT5G02540
gma-u.5
for
100794358
gma-u.5
for
100796920
gma-u.5
for
100795299
sly-u.5
for
101246319
sly-u.5
for
101255321
osa-u.5
for
4349944
osa-u.5
for
4349945
osa-u.5
for
4335398
zma-u.5
for
100272665
zma-u.5
for
100500950
zma-u.5
for
103641540
bra-r.6
for
103843875
bra-r.6
for
103867188
bra-r.6
for
103865606
vvi-u.5
for
100242214
vvi-u.5
for
100246509
vvi-u.5
for
100247484
ppo-u.5
for
7457761
ppo-u.5
for
7458067
ppo-u.5
for
7465871
mtr-u.5
for
25502056
mtr-u.5
for
25496527
mtr-u.5
for
25496525
tae-r.2
for
123060169
hvu-r.1
for
123446804
hvu-r.1
for
123396478
hvu-r.1
for
123442711
ghi-r.1
for
107948830
ghi-r.1
for
107933597
ghi-r.1
for
107963786
bna-r.1
for
106402344
bna-r.1
for
106389529
bna-r.1
for
106377123
sbi-r.1
for
8062560
sbi-r.1
for
8073299
sbi-r.1
for
8072772
sot-r.1
for
102578900
cit-r.1
for
102611079
cit-r.1
for
102620776
cit-r.1
for
102621246
bdi-r.1
for
100827514
bdi-r.1
for
100830870
bdi-r.1
for
100836169
nta-r.1
for
107778526
nta-r.1
for
107829977
nta-r.1
for
107825842


Ortholog ID: 223
Species cre cre cre ath ath ath gma gma sly sly sly osa osa zma zma zma bra bra bra vvi vvi vvi ppo ppo mtr mtr mtr tae tae hvu hvu hvu ghi ghi ghi bna bna sbi sbi sbi sot sot cit cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_12g556802v5 CHLRE_02g113652v5 CHLRE_09g398252v5 AT5G50130 Tic32-IVa AT4G23420 LOC100801849 LOC100785176 LOC101263363 LOC101257739 LOC101258297 LOC4335398 LOC4347912 LOC100272665 LOC100282710 LOC100217007 LOC103865606 LOC103833862 LOC103847440 LOC100242214 LOC100253030 LOC100264493 LOC7458067 LOC7487251 LOC25485056 LOC25485058 LOC25485057 LOC123095563 LOC123095568 LOC123446804 LOC123442711 LOC123438134 LOC107948830 LOC107901446 LOC107889705 LOC106443015 LOC106447367 LOC8062560 LOC8073299 LOC8072772 LOC102579773 LOC102599784 LOC102621246 LOC102621527 LOC102607364 LOC100827514 LOC100836169 LOC100827273 LOC107817497 LOC107810105 LOC107823666
Function* uncharacterized protein uncharacterized protein uncharacterized protein NAD(P)-binding Rossmann-fold superfamily protein NAD(P)-binding Rossmann-fold superfamily protein NAD(P)-binding Rossmann-fold superfamily protein short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic Short-chain dehydrogenase TIC 32 chloroplastic retinol dehydrogenase 12 Retinol dehydrogenase 14 short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32 A, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32 B, chloroplastic-like short-chain dehydrogenase TIC 32, chloroplastic-like short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32 B, chloroplastic-like short-chain dehydrogenase TIC 32 B, chloroplastic-like uncharacterized LOC8062560 short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic-like short-chain dehydrogenase TIC 32, chloroplastic-like short-chain dehydrogenase TIC 32, chloroplastic-like short-chain dehydrogenase TIC 32, chloroplastic-like short-chain dehydrogenase TIC 32 B, chloroplastic-like uncharacterized LOC100827514 short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32 B, chloroplastic short-chain dehydrogenase TIC 32, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
cre03440 Homologous recombination 2
cre03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma00062 Fatty acid elongation 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 5
sly01200 Carbon metabolism 5
sly00260 Glycine, serine and threonine metabolism 3
sly00670 One carbon pool by folate 3
sly00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 6
sly00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 2
osa03420 Nucleotide excision repair 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00062 Fatty acid elongation 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra00196 Photosynthesis - antenna proteins 3
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00071 Fatty acid degradation 2
vvi01212 Fatty acid metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00904 Diterpenoid biosynthesis 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr00030 Pentose phosphate pathway 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 8
ghi04626 Plant-pathogen interaction 8
ghi01240 Biosynthesis of cofactors 3
ghi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 3
ghi00941 Flavonoid biosynthesis 3
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
ghi00944 Flavone and flavonol biosynthesis 2
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
ghi01212 Fatty acid metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
bna01240 Biosynthesis of cofactors 3
bna00905 Brassinosteroid biosynthesis 2
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 3
sbi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 5
cit00710 Carbon fixation by Calvin cycle 3
cit01230 Biosynthesis of amino acids 3
cit04712 Circadian rhythm - plant 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
cit04981 Folate transport and metabolism 2
cit00561 Glycerolipid metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 6
nta01200 Carbon metabolism 6
nta04146 Peroxisome 6
nta00380 Tryptophan metabolism 2
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66055844 5725222 5720373 835078 828442 828441 100801849 100785176 101263363 101257739 101258297 4335398 4347912 100272665 100282710 100217007 103865606 103833862 103847440 100242214 100253030 100264493 7458067 7487251 25485056 25485058 25485057 123095563 123095568 123446804 123442711 123438134 107948830 107901446 107889705 106443015 106447367 8062560 8073299 8072772 102579773 102599784 102621246 102621527 102607364 100827514 100836169 100827273 107817497 107810105 107823666
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