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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_13g580850v5   uncharacterized protein 
 ath-u.5   rpl22   ribosomal protein L22 
 gma-u.5   547945   50S ribosomal protein L22, chloroplastic 
 gma-u.5   100499659   uncharacterized LOC100499659 
 sly-u.5   rpl22   ribosomal protein L22 
 osa-u.5   rpl22   ribosomal protein L22 
 zma-u.5   rpl22   ribosomal protein L22 
 vvi-u.5   rpl22   ribosomal protein L22 
 ppo-u.5   rpl22   ribosomal protein L22 
 mtr-u.5   11434744   50S ribosomal protein L22, chloroplastic 
 bna-r.1   rpl22   ribosomal protein L22 
 sbi-r.1   rpl22   ribosomal protein L22 
 sot-r.1   rpl22   ribosomal protein L22 
 cit-r.1   rpl22   ribosomal protein L22 
 cit-r.1   rpl22   ribosomal protein L22 
 cit-r.1   102606814   50S ribosomal protein L22, chloroplastic-like 
 bdi-r.1   rpl22   ribosomal protein L22 
 nta-r.1   rpl22   ribosomal protein L22 

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Top 50 coexpressed genes to CHLRE_13g580850v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_13g580850v5 (cre-r.1 coexpression data)

CoexMap"66056002"


creCHLRE_13g580850v5 | Entrez gene ID : 66056002    
Species cre ath gma sly osa zma vvi ppo mtr bna sbi sot cit bdi nta bra tae ghi hvu
Paralog 1 1 2 1 1 1 1 1 1 1 1 1 3 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0042255 [list] [network] ribosome assembly  (41 genes)  IEA  
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0015934 [list] [network] large ribosomal subunit  (72 genes)  IEA  
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_042917536.1 [sequence] [blastp]
XP_042917537.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 2  (predict for XP_042917536.1)
chlo 8,  cyto 2  (predict for XP_042917537.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_042917536.1)
mito 7,  chlo 3  (predict for XP_042917537.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_13g580850v5
ath-u.5
for
rpl22
gma-u.5
for
547945
gma-u.5
for
100499659
sly-u.5
for
rpl22
osa-u.5
for
rpl22
zma-u.5
for
rpl22
vvi-u.5
for
rpl22
ppo-u.5
for
rpl22
mtr-u.5
for
11434744
bna-r.1
for
rpl22
sbi-r.1
for
rpl22
sot-r.1
for
rpl22
cit-r.1
for
rpl22
cit-r.1
for
rpl22
cit-r.1
for
102606814
bdi-r.1
for
rpl22
nta-r.1
for
rpl22


Ortholog ID: 11811
Species cre ath gma gma sly osa zma vvi ppo mtr bna sbi sot cit cit cit bdi nta
Symbol CHLRE_13g580850v5 rpl22 LOC547945 LOC100499659 rpl22 rpl22 rpl22 rpl22 rpl22 LOC11434744 rpl22 rpl22 rpl22 rpl22 rpl22 LOC102606814 rpl22 rpl22
Function* uncharacterized protein ribosomal protein L22 50S ribosomal protein L22, chloroplastic uncharacterized LOC100499659 ribosomal protein L22 ribosomal protein L22 ribosomal protein L22 ribosomal protein L22 ribosomal protein L22 50S ribosomal protein L22, chloroplastic ribosomal protein L22 ribosomal protein L22 ribosomal protein L22 ribosomal protein L22 ribosomal protein L22 50S ribosomal protein L22, chloroplastic-like ribosomal protein L22 ribosomal protein L22
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
osa00190 Oxidative phosphorylation 3
osa00195 Photosynthesis 2
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr01240 Biosynthesis of cofactors 4
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna03020 RNA polymerase 3
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 8
sot03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
cit00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit01200 Carbon metabolism 3
cit00195 Photosynthesis 3
cit00710 Carbon fixation by Calvin cycle 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66056002 844721 547945 100499659 3950468 3131426 845218 4025022 4929712 11434744 11541997 4549091 4099883 4271191 4271176 102606814 6439880 800419
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