ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_16g673450v5	uncharacterized protein
cre-r.1	CHLRE_16g660331v5	uncharacterized protein
cre-r.1	CHLRE_03g183950v5	uncharacterized protein
cre-r.1	CHLRE_03g186800v5	uncharacterized protein
ath-u.5	CRK8	cysteine-rich RECEPTOR-like kinase
zma-u.5	103644180	bZIP transcription factor RISBZ2
zma-u.5	103653943	probable xyloglucan endotransglucosylase/hydrolase protein 30
zma-u.5	103635502	serine-rich adhesin for platelets
bra-r.6	103832953	ras-related protein RABG3e
bra-r.6	103832630	nuclear transcription factor Y subunit A-5
vvi-u.5	109122214	retrovirus-related Pol polyprotein from transposon RE2
tae-r.2	123113213	uncharacterized mitochondrial protein AtMg00810
ghi-r.1	121203494	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
ghi-r.1	121205006	uncharacterized LOC121205006
cit-r.1	102626317	cell division protein FtsZ homolog 2-1, chloroplastic
bdi-r.1	106866887	uncharacterized mitochondrial protein AtMg00810-like

Annotation

functional annotation

KEGG

GO BP

GO:0015074 [list] [network] DNA integration

(34 genes)

IEA

GO CC

GO MF

GO:0003676 [list] [network] nucleic acid binding

(1484 genes)

IEA

Protein

XP_042916147.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, mito 1, vacu 1, chlo 1, cyto 1, plas 1, cyto_mito 1, E.R._vacu 1, cyto_plas 1

(predict for XP_042916147.1)

Subcellular
localization
TargetP

other 7, mito 3

(predict for XP_042916147.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_16g673450v5	cre-r.1 for CHLRE_16g660331v5	cre-r.1 for CHLRE_03g183950v5	cre-r.1 for CHLRE_03g186800v5	ath-u.5 for CRK8	zma-u.5 for 103644180	zma-u.5 for 103653943	zma-u.5 for 103635502	bra-r.6 for 103832953	bra-r.6 for 103832630	vvi-u.5 for 109122214	tae-r.2 for 123113213	ghi-r.1 for 121203494	ghi-r.1 for 121205006	cit-r.1 for 102626317	bdi-r.1 for 106866887

Ortholog

Ortholog ID: 7

Species

cre

ath

zma

bra

ghi

bna

bdi

Symbol

CRK8

Function^*

uncharacterized protein

cysteine-rich RECEPTOR-like kinase

bZIP transcription factor RISBZ2

uncharacterized LOC100282400

general transcription and DNA repair factor IIH subunit TFB5

uncharacterized LOC121205006

uncharacterized mitochondrial protein AtMg00810-like

retrovirus-related Pol polyprotein from transposon TNT 1-94

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00260	Glycine, serine and threonine metabolism	2
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03420	Nucleotide excision repair	2
bra00190	Oxidative phosphorylation	2
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03250	Viral life cycle - HIV-1	2
ghi04075	Plant hormone signal transduction	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	4

Expression

Expression pattern

Entrez Gene ID^*

66052911

66052920

5728562

828415

103644180

100282400

103872007

121205006

125581568

100822297

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_16g673450v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_16g673450v5 (cre-r.1 coexpression data)


Species	cre	ath	zma	bra	vvi	tae	ghi	cit	bdi	sbi	osa	gma	sot	sly	mtr	bna	hvu	ppo	nta
Paralog	4	1	3	2	1	1	2	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_16g673450v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_16g673450v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**