ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_16g686552v5	uncharacterized protein
ath-u.5	AT3G25400	dCTP pyrophosphatase-like protein
gma-u.5	100500294	nucleoside triphosphate pyrophosphohydrolase-like
gma-u.5	100500214	uncharacterized LOC100500214
sly-u.5	101255503	uncharacterized LOC101255503
sly-u.5	101266563	uncharacterized LOC101266563
osa-u.5	4329363	uncharacterized LOC4329363
osa-u.5	4335533	uncharacterized LOC4335533
osa-u.5	4336398	uncharacterized LOC4336398
zma-u.5	100281061	mazG nucleotide pyrophosphohydrolase domain protein
zma-u.5	100282064	RS21-C6 protein
bra-r.6	103828559	dCTP pyrophosphatase 1
vvi-u.5	100266931	uncharacterized LOC100266931
vvi-u.5	100247693	uncharacterized LOC100247693
vvi-u.5	100241572	uncharacterized LOC100241572
ppo-u.5	7468483	uncharacterized LOC7468483
ppo-u.5	7488587	uncharacterized LOC7488587
ppo-u.5	7473465	uncharacterized LOC7473465
mtr-u.5	11431912	dCTP pyrophosphatase 1
tae-r.2	123041311	dCTP pyrophosphatase 1
tae-r.2	123188971	dCTP pyrophosphatase 1
tae-r.2	123053065	dCTP pyrophosphatase 1
hvu-r.1	123430171	dCTP pyrophosphatase 1-like
hvu-r.1	123430532	dCTP pyrophosphatase 1-like
ghi-r.1	107927354	dCTP pyrophosphatase 1
ghi-r.1	107915870	dCTP pyrophosphatase 1
ghi-r.1	107934822	dCTP pyrophosphatase 1
bna-r.1	106405862	dCTP pyrophosphatase 1-like
bna-r.1	111213284	dCTP pyrophosphatase 1-like
sbi-r.1	8054275	dCTP pyrophosphatase 1
sbi-r.1	8084526	dCTP pyrophosphatase 1
sot-r.1	102589138	dCTP pyrophosphatase 1-like
sot-r.1	102593064	dCTP pyrophosphatase 1-like
sot-r.1	102583324	dCTP pyrophosphatase 1-like
cit-r.1	102624370	uncharacterized LOC102624370
cit-r.1	102620578	uncharacterized LOC102620578
bdi-r.1	100840842	dCTP pyrophosphatase 1
bdi-r.1	100839966	dCTP pyrophosphatase 1
nta-r.1	142168659	uncharacterized LOC142168659
nta-r.1	107831666	uncharacterized LOC107831666
nta-r.1	107765557	uncharacterized LOC107765557

Top 50 coexpressed genes to CHLRE_16g686552v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_16g686552v5 (cre-r.1 coexpression data)

CoexMap"66056769"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0009143 [list] [network] nucleoside triphosphate catabolic process

(7 genes)

IEA

GO CC

GO MF

GO:0047429 [list] [network] nucleoside triphosphate diphosphatase activity

(9 genes)

IEA

Protein

XP_042915918.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 9, nucl 1, plas 1, nucl_plas 1

(predict for XP_042915918.1)

Subcellular
localization
TargetP

other 6, chlo 3

(predict for XP_042915918.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_16g686552v5	ath-u.5 for AT3G25400	gma-u.5 for 100500294	gma-u.5 for 100500214	sly-u.5 for 101255503	sly-u.5 for 101266563	osa-u.5 for 4329363	osa-u.5 for 4335533	osa-u.5 for 4336398	zma-u.5 for 100281061	zma-u.5 for 100282064	bra-r.6 for 103828559	vvi-u.5 for 100266931	vvi-u.5 for 100247693	vvi-u.5 for 100241572	ppo-u.5 for 7468483	ppo-u.5 for 7488587	ppo-u.5 for 7473465	mtr-u.5 for 11431912	tae-r.2 for 123041311	tae-r.2 for 123188971	tae-r.2 for 123053065	hvu-r.1 for 123430171	hvu-r.1 for 123430532	ghi-r.1 for 107927354	ghi-r.1 for 107915870	ghi-r.1 for 107934822	bna-r.1 for 106405862	bna-r.1 for 111213284	sbi-r.1 for 8054275	sbi-r.1 for 8084526	sot-r.1 for 102589138	sot-r.1 for 102593064	sot-r.1 for 102583324	cit-r.1 for 102624370	cit-r.1 for 102620578	bdi-r.1 for 100840842	bdi-r.1 for 100839966	nta-r.1 for 142168659	nta-r.1 for 107831666	nta-r.1 for 107765557

Ortholog

Ortholog ID: 1863

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

dCTP pyrophosphatase-like protein

nucleoside triphosphate pyrophosphohydrolase-like

uncharacterized LOC101255503

uncharacterized LOC101266563

uncharacterized LOC4329363

uncharacterized LOC4335533

uncharacterized LOC4336398

mazG nucleotide pyrophosphohydrolase domain protein

RS21-C6 protein

dCTP pyrophosphatase 1

uncharacterized LOC100247693

uncharacterized LOC100241572

uncharacterized LOC7488587

uncharacterized LOC7473465

uncharacterized LOC7459513

dCTP pyrophosphatase 1

dCTP pyrophosphatase 1-like

dCTP pyrophosphatase 1

dCTP pyrophosphatase 1-like

dCTP pyrophosphatase 1

dCTP pyrophosphatase 1-like

uncharacterized LOC102624370

uncharacterized LOC102620578

dCTP pyrophosphatase 1

uncharacterized LOC107792941

uncharacterized LOC107804932

uncharacterized LOC107819551

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	3
sly00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	3
osa00513	Various types of N-glycan biosynthesis	3
osa04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	3
osa00030	Pentose phosphate pathway	2
osa00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00240	Pyrimidine metabolism	2
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra03040	Spliceosome	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00220	Arginine biosynthesis	2
ppo00250	Alanine, aspartate and glutamate metabolism	2
ppo00910	Nitrogen metabolism	2
ppo01200	Carbon metabolism	2
ppo02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	3
ppo00030	Pentose phosphate pathway	2
ppo01200	Carbon metabolism	2
ppo00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	7
mtr03040	Spliceosome	5
mtr03420	Nucleotide excision repair	3
mtr03020	RNA polymerase	2
mtr01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00240	Pyrimidine metabolism	3
tae01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00240	Pyrimidine metabolism	3
tae01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00240	Pyrimidine metabolism	3
tae01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2
bna00750	Vitamin B6 metabolism	2
bna01240	Biosynthesis of cofactors	2
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00999	Biosynthesis of various plant secondary metabolites	2
sbi00010	Glycolysis / Gluconeogenesis	2
sbi00071	Fatty acid degradation	2
sbi00350	Tyrosine metabolism	2
sbi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00020	Citrate cycle (TCA cycle)	3
sot00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00240	Pyrimidine metabolism	2
cit01232	Nucleotide metabolism	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	5
nta04075	Plant hormone signal transduction	5
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	3
nta01232	Nucleotide metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

66056769

822124

100500294

101255503

101266563

4329363

4335533

4336398

100281061

100282064

103828559

100247693

100241572

7488587

7473465

7459513

11431912

123041311

123053065

123185761

123430171

123430532

107927354

107953463

106405862

111213284

8054275

8084526

102593064

102583324

102581660

102624370

102620578

100840842

100839966

107792941

107804932

107819551

The preparation time of this page was 0.4 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	2	3	2	1	3	3	1	3	2	3	2	2	3	2	2	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_16g686552v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_16g686552v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**