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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107784714   NEDD8-specific protease 1-like 
 nta-r.1   107762236   NEDD8-specific protease 1-like 
 sly-u.5   101249546   NEDD8-specific protease 1 
 sot-r.1   102591038   NEDD8-specific protease 1 
 ath-u.5   AT5G60190   Cysteine proteinases superfamily protein 
 gma-u.5   100800268   NEDD8-specific protease 1-like 
 bra-r.6   103856581   NEDD8-specific protease 1 
 bra-r.6   103845432   NEDD8-specific protease 1 
 vvi-u.5   104879564   NEDD8-specific protease 1 
 ppo-u.5   7478874   NEDD8-specific protease 1 
 mtr-u.5   11408023   NEDD8-specific protease 1 
 ghi-r.1   121217636   NEDD8-specific protease 1 
 ghi-r.1   107959256   NEDD8-specific protease 1 
 bna-r.1   106419663   NEDD8-specific protease 1 
 bna-r.1   106413968   NEDD8-specific protease 1 
 bna-r.1   106385143   NEDD8-specific protease 1 
 cit-r.1   102628280   NEDD8-specific protease 1 
 osa-u.5   4349534   uncharacterized LOC4349534 
 osa-u.5   4351243   uncharacterized LOC4351243 
 zma-u.5   103641153   NEDD8-specific protease 1 
 tae-r.2   123120569   WRKY transcription factor 44 
 tae-r.2   123103252   WRKY transcription factor 44 
 sbi-r.1   8072154   uncharacterized LOC8072154 
 bdi-r.1   104584815   NEDD8-specific protease 1 
 cre-r.1   CHLRE_01g055050v5   uncharacterized protein 

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Top 50 coexpressed genes to 107784714 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107784714 (nta-r.1 coexpression data)

CoexMap"107784714"


ntaLOC107784714 | Entrez gene ID : 107784714      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae sbi bdi cre hvu
Paralog 2 1 1 1 1 2 1 1 1 2 3 1 2 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000338 [list] [network] protein deneddylation  (8 genes)  IEA  
GO:0006508 [list] [network] proteolysis  (1504 genes)  IEA  
GO CC
GO MF
GO:0019784 [list] [network] deNEDDylase activity  (2 genes)  IEA  
GO:0008234 [list] [network] cysteine-type peptidase activity  (324 genes)  IEA  
Protein XP_016461369.1 [sequence] [blastp]
XP_016461370.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for XP_016461369.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for XP_016461370.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016461369.1)
other 9  (predict for XP_016461370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107784714
nta-r.1
for
107762236
sly-u.5
for
101249546
sot-r.1
for
102591038
ath-u.5
for
AT5G60190
gma-u.5
for
100800268
bra-r.6
for
103856581
bra-r.6
for
103845432
vvi-u.5
for
104879564
ppo-u.5
for
7478874
mtr-u.5
for
11408023
ghi-r.1
for
121217636
ghi-r.1
for
107959256
bna-r.1
for
106419663
bna-r.1
for
106413968
bna-r.1
for
106385143
cit-r.1
for
102628280
osa-u.5
for
4349534
osa-u.5
for
4351243
zma-u.5
for
103641153
tae-r.2
for
123120569
tae-r.2
for
123103252
sbi-r.1
for
8072154
bdi-r.1
for
104584815
cre-r.1
for
CHLRE_01g055050v5


Ortholog ID: 8662
Species nta nta sly sot ath gma bra bra vvi ppo mtr ghi ghi bna bna bna cit osa osa zma tae tae sbi bdi cre
Symbol LOC107784714 LOC107762236 LOC101249546 LOC102591038 AT5G60190 LOC100800268 LOC103856581 LOC103845432 LOC104879564 LOC7478874 LOC11408023 LOC121217636 LOC107959256 LOC106419663 LOC106413968 LOC106385143 LOC102628280 LOC4349534 LOC4351243 LOC103641153 LOC123120569 LOC123103252 LOC8072154 LOC104584815 CHLRE_01g055050v5
Function* NEDD8-specific protease 1-like NEDD8-specific protease 1-like NEDD8-specific protease 1 NEDD8-specific protease 1 Cysteine proteinases superfamily protein NEDD8-specific protease 1-like NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 uncharacterized LOC4349534 uncharacterized LOC4351243 NEDD8-specific protease 1 WRKY transcription factor 44 WRKY transcription factor 44 uncharacterized LOC8072154 NEDD8-specific protease 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly03008 Ribosome biogenesis in eukaryotes 3
sly03083 Polycomb repressive complex 3
sly04712 Circadian rhythm - plant 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra01240 Biosynthesis of cofactors 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107784714 107762236 101249546 102591038 836141 100800268 103856581 103845432 104879564 7478874 11408023 121217636 107959256 106419663 106413968 106385143 102628280 4349534 4351243 103641153 123120569 123103252 8072154 104584815 5725777
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