ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107786723	uncharacterized LOC107786723
nta-r.1	107771797	uncharacterized LOC107771797
nta-r.1	107786394	uncharacterized LOC107786394
nta-r.1	107787544	uncharacterized LOC107787544
sly-u.5	101257977	uncharacterized LOC101257977
sly-u.5	101264187	uncharacterized LOC101264187
sly-u.5	101265979	uncharacterized LOC101265979
sot-r.1	102587465	uncharacterized LOC102587465
sot-r.1	102584656	uncharacterized LOC102584656
sot-r.1	102578222	uncharacterized LOC102578222
ath-u.5	AT3G49800	BSD domain-containing protein
ath-u.5	AT5G65910	BSD domain-containing protein
ath-u.5	AT1G10720	BSD domain-containing protein
gma-u.5	100801926	uncharacterized LOC100801926
gma-u.5	100780902	uncharacterized LOC100780902
gma-u.5	100794286	uncharacterized LOC100794286
bra-r.6	103827655	uncharacterized LOC103827655
bra-r.6	103874029	uncharacterized LOC103874029
vvi-u.5	100853925	uncharacterized LOC100853925
vvi-u.5	100250545	uncharacterized LOC100250545
ppo-u.5	7497317	uncharacterized LOC7497317
ppo-u.5	7497303	uncharacterized LOC7497303
ppo-u.5	7465556	uncharacterized LOC7465556
mtr-u.5	11434947	uncharacterized LOC11434947
mtr-u.5	25489981	uncharacterized LOC25489981
ghi-r.1	107932574	uncharacterized LOC107932574
ghi-r.1	107938333	uncharacterized LOC107938333
bna-r.1	125575856	uncharacterized LOC125575856
bna-r.1	BNACNNG24920D	uncharacterized BNACNNG24920D
bna-r.1	BNAC03G48720D	uncharacterized BNAC03G48720D
cit-r.1	102630892	uncharacterized LOC102630892
cit-r.1	102607924	uncharacterized LOC102607924
osa-u.5	4339282	uncharacterized LOC4339282
osa-u.5	4325495	uncharacterized LOC4325495
zma-u.5	100282894	uncharacterized LOC100282894
zma-u.5	109941521	uncharacterized LOC109941521
tae-r.2	123062666	uncharacterized LOC123062666
tae-r.2	123062165	uncharacterized LOC123062165
tae-r.2	123070892	uncharacterized LOC123070892
hvu-r.1	123444497	uncharacterized LOC123444497
hvu-r.1	123447313	uncharacterized LOC123447313
sbi-r.1	8080104	uncharacterized LOC8080104
sbi-r.1	8079256	uncharacterized LOC8079256
bdi-r.1	100839301	uncharacterized LOC100839301
bdi-r.1	100835721	uncharacterized LOC100835721

Top 50 coexpressed genes to 107786723 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107786723 (nta-r.1 coexpression data)

CoexMap"107786723"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016463720.2 [sequence] [blastp]
XP_016463722.2 [sequence] [blastp]
XP_016463723.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 2, nucl 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for XP_016463720.2)
cyto 4, chlo 2, nucl 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for XP_016463722.2)
cyto 4, nucl 3, chlo 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for XP_016463723.2)

Subcellular
localization
TargetP

other 8	(predict for XP_016463720.2)
other 8	(predict for XP_016463722.2)
other 8	(predict for XP_016463723.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107786723	nta-r.1 for 107771797	nta-r.1 for 107786394	nta-r.1 for 107787544	sly-u.5 for 101257977	sly-u.5 for 101264187	sly-u.5 for 101265979	sot-r.1 for 102587465	sot-r.1 for 102584656	sot-r.1 for 102578222	ath-u.5 for AT3G49800	ath-u.5 for AT5G65910	ath-u.5 for AT1G10720	gma-u.5 for 100801926	gma-u.5 for 100780902	gma-u.5 for 100794286	bra-r.6 for 103827655	bra-r.6 for 103874029	vvi-u.5 for 100853925	vvi-u.5 for 100250545	ppo-u.5 for 7497317	ppo-u.5 for 7497303	ppo-u.5 for 7465556	mtr-u.5 for 11434947	mtr-u.5 for 25489981	ghi-r.1 for 107932574	ghi-r.1 for 107938333	bna-r.1 for 125575856	bna-r.1 for BNACNNG24920D	bna-r.1 for BNAC03G48720D	cit-r.1 for 102630892	cit-r.1 for 102607924	osa-u.5 for 4339282	osa-u.5 for 4325495	zma-u.5 for 100282894	zma-u.5 for 109941521	tae-r.2 for 123062666	tae-r.2 for 123062165	tae-r.2 for 123070892	hvu-r.1 for 123444497	hvu-r.1 for 123447313	sbi-r.1 for 8080104	sbi-r.1 for 8079256	bdi-r.1 for 100839301	bdi-r.1 for 100835721

Ortholog

Ortholog ID: 2090

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107787544

uncharacterized LOC107804761

uncharacterized LOC107791927

uncharacterized LOC101264187

uncharacterized LOC101265979

uncharacterized LOC101253480

uncharacterized LOC102578222

uncharacterized LOC102589743

BSD domain-containing protein

uncharacterized LOC100801926

uncharacterized LOC100780902

uncharacterized LOC100794286

uncharacterized LOC103827655

ESF1 homolog

uncharacterized LOC100853925

uncharacterized LOC100250545

uncharacterized LOC7497317

uncharacterized LOC7497303

uncharacterized LOC7465556

uncharacterized LOC11434947

uncharacterized LOC25489981

uncharacterized LOC107938333

uncharacterized LOC107940932

uncharacterized LOC107913313

uncharacterized LOC125575856

uncharacterized BNAC03G48720D

ESF1 homolog

uncharacterized LOC102630892

uncharacterized LOC102607924

uncharacterized LOC4339282

uncharacterized LOC4325495

uncharacterized LOC100282894

uncharacterized LOC109941521

uncharacterized LOC123170570

uncharacterized LOC123182607

uncharacterized LOC123139854

uncharacterized LOC123444497

uncharacterized LOC123447313

uncharacterized LOC8080104

uncharacterized LOC8079256

uncharacterized LOC100839301

uncharacterized LOC100835721

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00260	Glycine, serine and threonine metabolism	2
nta00630	Glyoxylate and dicarboxylate metabolism	2
nta01200	Carbon metabolism	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	3
nta04382	Cornified envelope formation	3
nta00510	N-Glycan biosynthesis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2
nta00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	3
sly00670	One carbon pool by folate	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	3
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	3
vvi04382	Cornified envelope formation	3
vvi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2
ppo00270	Cysteine and methionine metabolism	2
ppo01230	Biosynthesis of amino acids	2
ppo00940	Phenylpropanoid biosynthesis	2
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2
mtr00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4
ghi03022	Basal transcription factors	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00030	Pentose phosphate pathway	2
ghi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	3
ghi00030	Pentose phosphate pathway	2
ghi00670	One carbon pool by folate	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2
bna04016	MAPK signaling pathway - plant	2
bna04070	Phosphatidylinositol signaling system	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	2
bna00860	Porphyrin metabolism	2
bna01240	Biosynthesis of cofactors	2
bna00020	Citrate cycle (TCA cycle)	2
bna01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	3
osa04136	Autophagy - other	3
osa00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae04382	Cornified envelope formation	3
tae03083	Polycomb repressive complex	2
tae04120	Ubiquitin mediated proteolysis	2
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00564	Glycerophospholipid metabolism	2
bdi00565	Ether lipid metabolism	2
bdi04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

107787544

107804761

107791927

101264187

101265979

101253480

102578222

102589743

824142

836720

837615

100801926

100780902

100794286

103827655

103843256

100853925

100250545

7497317

7497303

7465556

11434947

25489981

107938333

107940932

107913313

125575856

106346631

106415941

102630892

102607924

4339282

4325495

100282894

109941521

123170570

123182607

123139854

123444497

123447313

8080104

8079256

100839301

100835721

The preparation time of this page was 0.3 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	2	2	3	2	2	3	2	2	2	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107786723 (nta-r.1 coexpression data)

Top 50 enrichment test to 107786723 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**