ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107811430	protein DEFECTIVE IN EXINE FORMATION 1
nta-r.1	107818260	protein DEFECTIVE IN EXINE FORMATION 1
nta-r.1	107785702	protein DEFECTIVE IN EXINE FORMATION 1-like
nta-r.1	107807393	protein DEFECTIVE IN EXINE FORMATION 1
sly-u.5	101254824	protein DEFECTIVE IN EXINE FORMATION 1
sly-u.5	101244539	protein DEFECTIVE IN EXINE FORMATION 1-like
sot-r.1	102581499	protein DEFECTIVE IN EXINE FORMATION 1
sot-r.1	102584117	protein DEFECTIVE IN EXINE FORMATION 1-like
ath-u.5	DEX1	defective in exine formation protein (DEX1)
gma-u.5	100805038	protein DEFECTIVE IN EXINE FORMATION 1
gma-u.5	100500591	protein DEFECTIVE IN EXINE FORMATION 1
bra-r.6	103870563	protein DEFECTIVE IN EXINE FORMATION 1
bra-r.6	103848276	protein DEFECTIVE IN EXINE FORMATION 1
vvi-u.5	100251006	protein DEFECTIVE IN EXINE FORMATION 1
ppo-u.5	7487450	protein DEFECTIVE IN EXINE FORMATION 1
ppo-u.5	18100002	protein DEFECTIVE IN EXINE FORMATION 1
mtr-u.5	11419198	protein DEFECTIVE IN EXINE FORMATION 1
ghi-r.1	107948870	protein DEFECTIVE IN EXINE FORMATION 1
ghi-r.1	107913702	protein DEFECTIVE IN EXINE FORMATION 1
ghi-r.1	107899039	protein DEFECTIVE IN EXINE FORMATION 1
bna-r.1	125580403	protein DEFECTIVE IN EXINE FORMATION 1-like
bna-r.1	111215796	protein DEFECTIVE IN EXINE FORMATION 1
bna-r.1	125587933	protein DEFECTIVE IN EXINE FORMATION 1-like
cit-r.1	102610496	protein DEFECTIVE IN EXINE FORMATION 1
osa-u.5	4334634	protein DEFECTIVE IN EXINE FORMATION 1
zma-u.5	103645720	protein DEFECTIVE IN EXINE FORMATION 1
tae-r.2	123105730	protein DEFECTIVE IN EXINE FORMATION 1
tae-r.2	123114062	protein DEFECTIVE IN EXINE FORMATION 1
tae-r.2	123123552	protein DEFECTIVE IN EXINE FORMATION 1
hvu-r.1	123453117	protein DEFECTIVE IN EXINE FORMATION 1
sbi-r.1	8079704	protein DEFECTIVE IN EXINE FORMATION 1
bdi-r.1	100842013	protein DEFECTIVE IN EXINE FORMATION 1
cre-r.1	CHLRE_04g214097v5	uncharacterized protein

Top 50 coexpressed genes to 107811430 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107811430 (nta-r.1 coexpression data)

CoexMap"107811430"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(7685 genes)

IEA

Protein

XP_016491840.2 [sequence] [blastp]
XP_016491841.2 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, chlo 2, cyto 1, mito 1, extr 1, E.R. 1, golg 1, cyto_E.R. 1	(predict for XP_016491840.2)
chlo 3, cyto 3, vacu 2, plas 1, E.R. 1, golg 1, golg_plas 1, E.R._plas 1	(predict for XP_016491841.2)

Subcellular
localization
TargetP

scret 8	(predict for XP_016491840.2)
other 6	(predict for XP_016491841.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107811430	nta-r.1 for 107818260	nta-r.1 for 107785702	nta-r.1 for 107807393	sly-u.5 for 101254824	sly-u.5 for 101244539	sot-r.1 for 102581499	sot-r.1 for 102584117	ath-u.5 for DEX1	gma-u.5 for 100805038	gma-u.5 for 100500591	bra-r.6 for 103870563	bra-r.6 for 103848276	vvi-u.5 for 100251006	ppo-u.5 for 7487450	ppo-u.5 for 18100002	mtr-u.5 for 11419198	ghi-r.1 for 107948870	ghi-r.1 for 107913702	ghi-r.1 for 107899039	bna-r.1 for 125580403	bna-r.1 for 111215796	bna-r.1 for 125587933	cit-r.1 for 102610496	osa-u.5 for 4334634	zma-u.5 for 103645720	tae-r.2 for 123105730	tae-r.2 for 123114062	tae-r.2 for 123123552	hvu-r.1 for 123453117	sbi-r.1 for 8079704	bdi-r.1 for 100842013	cre-r.1 for CHLRE_04g214097v5

Ortholog

Ortholog ID: 5986

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

DEX1

Function^*

protein DEFECTIVE IN EXINE FORMATION 1

protein DEFECTIVE IN EXINE FORMATION 1-like

protein DEFECTIVE IN EXINE FORMATION 1

protein DEFECTIVE IN EXINE FORMATION 1-like

defective in exine formation protein (DEX1)

protein DEFECTIVE IN EXINE FORMATION 1

protein DEFECTIVE IN EXINE FORMATION 1-like

protein DEFECTIVE IN EXINE FORMATION 1

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	6
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	4
sly00510	N-Glycan biosynthesis	3
sly00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	2
sot00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath00510	N-Glycan biosynthesis	3
ath00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma00970	Aminoacyl-tRNA biosynthesis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	7
vvi00510	N-Glycan biosynthesis	5
vvi00513	Various types of N-glycan biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	5
mtr00510	N-Glycan biosynthesis	4
mtr00513	Various types of N-glycan biosynthesis	3
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	3
ghi00230	Purine metabolism	2
ghi00270	Cysteine and methionine metabolism	2
ghi00480	Glutathione metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	3
bna04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	3
bna04141	Protein processing in endoplasmic reticulum	3
bna02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	3
bna04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2
cit01250	Biosynthesis of nucleotide sugars	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00510	N-Glycan biosynthesis	4
zma04141	Protein processing in endoplasmic reticulum	4
zma00513	Various types of N-glycan biosynthesis	2
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5
tae00510	N-Glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	8
tae00510	N-Glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	6
tae00510	N-Glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	3
hvu04141	Protein processing in endoplasmic reticulum	2
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	5
bdi03015	mRNA surveillance pathway	2
bdi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00510	N-Glycan biosynthesis	2
cre04141	Protein processing in endoplasmic reticulum	2
cre00514	Other types of O-glycan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

107811430

107818260

107807393

101254824

101244539

102581499

102584117

820063

100805038

100500591

103870563

103848276

100251006

7487450

18100002

11419198

107948870

107899039

107890982

125580403

111215796

106427958

102610496

4334634

103645720

123105730

123114062

123123552

123453117

8079704

100842013

5728645

The preparation time of this page was 0.1 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	1	2	2	1	2	1	3	3	1	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107811430 (nta-r.1 coexpression data)

Top 50 enrichment test to 107811430 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**