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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107828333   histone-binding protein MSI1 
 nta-r.1   107828303   WD-40 repeat-containing protein MSI2 
 nta-r.1   107765912   WD-40 repeat-containing protein MSI2 
 nta-r.1   107804023   histone-binding protein MSI1 
 sly-u.5   101266569   WD-40 repeat-containing protein MSI2 
 sly-u.5   MSI1   WD-40 repeat-containing protein MSI1 
 sot-r.1   102593580   WD-40 repeat-containing protein MSI1 
 sot-r.1   102599978   WD-40 repeat-containing protein MSI2-like 
 ath-u.5   MSI3   Transducin family protein / WD-40 repeat family protein 
 ath-u.5   MSI2   Transducin family protein / WD-40 repeat family protein 
 ath-u.5   MSI1   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100799018   WD-40 repeat-containing protein MSI3 
 gma-u.5   100791834   WD-40 repeat-containing protein MSI2-like 
 gma-u.5   100127416   MSI1 
 bra-r.6   103846012   WD-40 repeat-containing protein MSI2 
 bra-r.6   103845251   histone-binding protein MSI1 
 bra-r.6   103837783   WD-40 repeat-containing protein MSI2 
 vvi-u.5   100265787   WD-40 repeat-containing protein MSI3 
 vvi-u.5   100247592   WD-40 repeat-containing protein MSI1 
 ppo-u.5   7470405   WD-40 repeat-containing protein MSI3 
 ppo-u.5   7469389   WD-40 repeat-containing protein MSI1 
 ppo-u.5   7481463   WD-40 repeat-containing protein MSI1 
 mtr-u.5   11440234   WD-40 repeat-containing protein MSI3 
 mtr-u.5   11407768   WD-40 repeat-containing protein MSI1 
 ghi-r.1   107936990   WD-40 repeat-containing protein MSI3 
 ghi-r.1   107933309   WD-40 repeat-containing protein MSI1 
 ghi-r.1   107928902   WD-40 repeat-containing protein MSI3 
 bna-r.1   125576673   WD-40 repeat-containing protein MSI2 
 bna-r.1   106435642   histone-binding protein MSI1 
 bna-r.1   106426050   histone-binding protein MSI1 
 cit-r.1   102608815   WD-40 repeat-containing protein MSI1 
 cit-r.1   102628661   WD-40 repeat-containing protein MSI3 
 osa-u.5   4347727   WD-40 repeat-containing protein MSI3 
 osa-u.5   4333540   histone-binding protein MSI1 homolog 
 zma-u.5   103643702   histone-binding protein MSI1 homolog 
 zma-u.5   542545   MSI type nucleosome/chromatin assembly factor C 
 zma-u.5   103628047   histone-binding protein MSI1 homolog 
 tae-r.2   123113217   histone-binding protein MSI1 homolog 
 tae-r.2   123112892   histone-binding protein MSI1 
 tae-r.2   123104623   histone-binding protein MSI1 
 hvu-r.1   123452123   histone-binding protein MSI1 homolog 
 hvu-r.1   123400180   histone-binding protein MSI1 homolog 
 sbi-r.1   8062219   histone-binding protein MSI1 homolog 
 sbi-r.1   8067288   histone-binding protein MSI1 homolog 
 bdi-r.1   100842169   histone-binding protein MSI1 
 bdi-r.1   100837145   histone-binding protein MSI1 homolog 
 cre-r.1   CHLRE_12g523200v5   uncharacterized protein 

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Top 50 coexpressed genes to 107828333 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107828333 (nta-r.1 coexpression data)

CoexMap"107828333"


ntaLOC107828333 | Entrez gene ID : 107828333    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 3 3 2 3 2 3 3 2 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03082 [list] [network] ATP-dependent chromatin remodeling (124 genes)
nta03083 [list] [network] Polycomb repressive complex (125 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075094791.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_075094791.1)
Subcellular
localization
TargetP
other 9  (predict for XP_075094791.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107828333
nta-r.1
for
107828303
nta-r.1
for
107765912
nta-r.1
for
107804023
sly-u.5
for
101266569
sly-u.5
for
MSI1
sot-r.1
for
102593580
sot-r.1
for
102599978
ath-u.5
for
MSI3
ath-u.5
for
MSI2
ath-u.5
for
MSI1
gma-u.5
for
100799018
gma-u.5
for
100791834
gma-u.5
for
100127416
bra-r.6
for
103846012
bra-r.6
for
103845251
bra-r.6
for
103837783
vvi-u.5
for
100265787
vvi-u.5
for
100247592
ppo-u.5
for
7470405
ppo-u.5
for
7469389
ppo-u.5
for
7481463
mtr-u.5
for
11440234
mtr-u.5
for
11407768
ghi-r.1
for
107936990
ghi-r.1
for
107933309
ghi-r.1
for
107928902
bna-r.1
for
125576673
bna-r.1
for
106435642
bna-r.1
for
106426050
cit-r.1
for
102608815
cit-r.1
for
102628661
osa-u.5
for
4347727
osa-u.5
for
4333540
zma-u.5
for
103643702
zma-u.5
for
542545
zma-u.5
for
103628047
tae-r.2
for
123113217
tae-r.2
for
123112892
tae-r.2
for
123104623
hvu-r.1
for
123452123
hvu-r.1
for
123400180
sbi-r.1
for
8062219
sbi-r.1
for
8067288
bdi-r.1
for
100842169
bdi-r.1
for
100837145
cre-r.1
for
CHLRE_12g523200v5


Ortholog ID: 2199
Species nta nta nta sly sly sot sot ath ath ath gma gma gma bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107828333 LOC107828303 LOC107804023 LOC101266569 MSI1 LOC102593580 LOC102599978 MSI3 MSI2 MSI1 LOC100799018 LOC100791834 LOC100796217 LOC103846012 LOC103837783 LOC103856707 LOC100265787 LOC100247592 LOC7470405 LOC7469389 LOC7494244 LOC11440234 LOC11407768 LOC107933309 LOC107928902 LOC107920532 LOC106420262 LOC106347047 LOC106388250 LOC102608815 LOC102628661 LOC4347727 LOC4333540 LOC103643702 LOC103628047 LOC118476057 LOC123113217 LOC123104623 LOC123122733 LOC123452123 LOC123400180 LOC8062219 LOC8067288 LOC100842169 LOC100837145 CHLRE_12g523200v5
Function* histone-binding protein MSI1 WD-40 repeat-containing protein MSI2 histone-binding protein MSI1 WD-40 repeat-containing protein MSI2 WD-40 repeat-containing protein MSI1 WD-40 repeat-containing protein MSI1 WD-40 repeat-containing protein MSI2-like Transducin family protein / WD-40 repeat family protein Transducin family protein / WD-40 repeat family protein Transducin/WD40 repeat-like superfamily protein WD-40 repeat-containing protein MSI3 WD-40 repeat-containing protein MSI2-like WD-40 repeat-containing protein MSI1 WD-40 repeat-containing protein MSI2 WD-40 repeat-containing protein MSI2 histone-binding protein MSI1 WD-40 repeat-containing protein MSI3 WD-40 repeat-containing protein MSI1 WD-40 repeat-containing protein MSI3 WD-40 repeat-containing protein MSI1 WD-40 repeat-containing protein MSI2 WD-40 repeat-containing protein MSI3 WD-40 repeat-containing protein MSI1 WD-40 repeat-containing protein MSI1 WD-40 repeat-containing protein MSI3 WD-40 repeat-containing protein MSI1 histone-binding protein MSI1-like WD-40 repeat-containing protein MSI2 histone-binding protein MSI1 WD-40 repeat-containing protein MSI1 WD-40 repeat-containing protein MSI3 WD-40 repeat-containing protein MSI3 histone-binding protein MSI1 homolog histone-binding protein MSI1 homolog histone-binding protein MSI1 homolog uncharacterized LOC118476057 histone-binding protein MSI1 homolog histone-binding protein MSI1 histone-binding protein MSI1 homolog histone-binding protein MSI1 homolog histone-binding protein MSI1 homolog histone-binding protein MSI1 homolog histone-binding protein MSI1 homolog histone-binding protein MSI1 histone-binding protein MSI1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 12
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
ath03082 ATP-dependent chromatin remodeling 4
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 3
gma03030 DNA replication 2
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
bra03440 Homologous recombination 2
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 6
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 2
bra04141 Protein processing in endoplasmic reticulum 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi03018 RNA degradation 4
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03083 Polycomb repressive complex 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03010 Ribosome 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna03083 Polycomb repressive complex 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna03083 Polycomb repressive complex 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 7
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03040 Spliceosome 4
osa03015 mRNA surveillance pathway 3
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 6
tae03083 Polycomb repressive complex 6
tae04120 Ubiquitin mediated proteolysis 3
tae03030 DNA replication 2
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae03410 Base excision repair 4
tae03018 RNA degradation 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 5
tae03083 Polycomb repressive complex 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03040 Spliceosome 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00620 Pyruvate metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 3
sbi01232 Nucleotide metabolism 3
sbi03030 DNA replication 2
sbi00230 Purine metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 4
cre03040 Spliceosome 3
cre03082 ATP-dependent chromatin remodeling 2
cre03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107828333 107828303 107804023 101266569 543534 102593580 102599978 829657 816179 835935 100799018 100791834 100796217 103846012 103837783 103856707 100265787 100247592 7470405 7469389 7494244 11440234 11407768 107933309 107928902 107920532 106420262 106347047 106388250 102608815 102628661 4347727 4333540 103643702 103628047 118476057 123113217 123104623 123122733 123452123 123400180 8062219 8067288 100842169 100837145 5722539
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