ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-e.1	4328366	protein IRX15-LIKE
osa-u.5	4328366	protein IRX15-LIKE
osa-r.6	4328366	protein IRX15-LIKE
osa-u.5	4337222	protein IRX15-LIKE
osa-u.5	4341892	protein IRX15-LIKE
tae-r.2	123136396	protein IRX15-LIKE
tae-r.2	123047110	protein IRX15-LIKE
tae-r.2	123054922	protein IRX15-LIKE
hvu-r.1	123403345	protein IRREGULAR XYLEM 15-like
hvu-r.1	123412436	protein IRX15-LIKE-like
hvu-r.1	123431035	protein IRX15-LIKE-like
bdi-r.1	100833033	protein IRX15-LIKE
bdi-r.1	100834864	protein IRX15-LIKE
bdi-r.1	100835417	protein IRREGULAR XYLEM 15
zma-u.5	103645068	protein IRX15-LIKE-like
zma-u.5	100193840	Protein IRX15-LIKE
zma-u.5	100273350	protein IRREGULAR XYLEM 15
sbi-r.1	8076086	protein IRREGULAR XYLEM 15
sbi-r.1	8079587	protein IRX15-LIKE
sbi-r.1	8063777	protein IRX15-LIKE
ath-u.5	IRX15	IRREGULAR XYLEM protein (DUF579)
ath-u.5	IRX15-L	IRREGULAR XYLEM protein (DUF579)
gma-u.5	100817866	xylan biosynthesis protein IRX15-like protein
gma-u.5	100812777	protein IRX15-LIKE
gma-u.5	100803555	protein IRREGULAR XYLEM 15
sly-u.5	101244631	protein IRX15-LIKE-like
sly-u.5	101267962	protein IRX15-LIKE-like
sly-u.5	101257020	protein IRX15-LIKE
bra-r.6	103829528	protein IRX15-LIKE
bra-r.6	103840933	protein IRREGULAR XYLEM 15
vvi-u.5	100267469	protein IRX15-LIKE
vvi-u.5	100259508	protein IRX15-LIKE
ppo-u.5	7492052	protein IRX15-LIKE
ppo-u.5	7462596	protein IRX15-LIKE
ppo-u.5	7476398	protein IRX15-LIKE
mtr-u.5	25494449	protein IRX15-LIKE
mtr-u.5	25494450	protein IRX15-LIKE
mtr-u.5	25493480	protein IRX15-LIKE
ghi-r.1	107924836	protein IRX15-LIKE
ghi-r.1	121223654	protein IRX15-LIKE
ghi-r.1	107945484	protein IRX15-LIKE
bna-r.1	106359619	protein IRX15-LIKE
bna-r.1	106394687	protein IRREGULAR XYLEM 15-like
bna-r.1	106366785	protein IRX15-LIKE
sot-r.1	102583189	protein IRX15-LIKE-like
sot-r.1	102581006	protein IRX15-LIKE-like
sot-r.1	102589163	protein IRX15-LIKE-like
cit-r.1	102614473	protein IRX15-LIKE-like
cit-r.1	102625331	protein IRX15-LIKE
nta-r.1	107765144	protein IRREGULAR XYLEM 15
nta-r.1	107759843	protein IRX15-LIKE-like
nta-r.1	107790336	protein IRX15-LIKE-like

Top 50 coexpressed genes to 4328366 (osa-e.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4328366 (osa-e.1 coexpression data)

CoexMap"4328366"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045492 [list] [network] xylan biosynthetic process	(34 genes)	IEA
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis	(47 genes)	IEA

GO CC

GO:0005794 [list] [network] Golgi apparatus

(532 genes)

IEA

GO MF

Protein

XP_015627523.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, vacu 1, cyto 1, mito 1, golg 1, E.R._vacu 1

(predict for XP_015627523.1)

Subcellular
localization
TargetP

chlo 3, other 3

(predict for XP_015627523.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-e.1 for 4328366	osa-u.5 for 4328366	osa-r.6 for 4328366	osa-u.5 for 4337222	osa-u.5 for 4341892	tae-r.2 for 123136396	tae-r.2 for 123047110	tae-r.2 for 123054922	hvu-r.1 for 123403345	hvu-r.1 for 123412436	hvu-r.1 for 123431035	bdi-r.1 for 100833033	bdi-r.1 for 100834864	bdi-r.1 for 100835417	zma-u.5 for 103645068	zma-u.5 for 100193840	zma-u.5 for 100273350	sbi-r.1 for 8076086	sbi-r.1 for 8079587	sbi-r.1 for 8063777	ath-u.5 for IRX15	ath-u.5 for IRX15-L	gma-u.5 for 100817866	gma-u.5 for 100812777	gma-u.5 for 100803555	sly-u.5 for 101244631	sly-u.5 for 101267962	sly-u.5 for 101257020	bra-r.6 for 103829528	bra-r.6 for 103840933	vvi-u.5 for 100267469	vvi-u.5 for 100259508	ppo-u.5 for 7492052	ppo-u.5 for 7462596	ppo-u.5 for 7476398	mtr-u.5 for 25494449	mtr-u.5 for 25494450	mtr-u.5 for 25493480	ghi-r.1 for 107924836	ghi-r.1 for 121223654	ghi-r.1 for 107945484	bna-r.1 for 106359619	bna-r.1 for 106394687	bna-r.1 for 106366785	sot-r.1 for 102583189	sot-r.1 for 102581006	sot-r.1 for 102589163	cit-r.1 for 102614473	cit-r.1 for 102625331	nta-r.1 for 107765144	nta-r.1 for 107759843	nta-r.1 for 107790336

Ortholog

Ortholog ID: 1806

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

IRX15

IRX15-L

Function^*

protein IRX15-LIKE

protein IRREGULAR XYLEM 15-like

protein IRX15-LIKE-like

protein IRX15-LIKE

protein IRREGULAR XYLEM 15

protein IRX15-LIKE-like

Protein IRX15-LIKE

uncharacterized LOC100286337

protein IRREGULAR XYLEM 15

protein IRX15-LIKE

IRREGULAR XYLEM protein (DUF579)

xylan biosynthesis protein IRX15-like protein

protein IRX15-LIKE

protein IRX15-LIKE-like

protein IRX15-LIKE

protein IRREGULAR XYLEM 15

protein IRX15-LIKE

protein IRREGULAR XYLEM 15-like

protein IRX15-LIKE

protein IRX15-LIKE-like

protein IRX15-LIKE

protein IRX15-LIKE-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3
hvu04142	Lysosome	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04145	Phagosome	5
sbi04517	IgSF CAM signaling	5
sbi04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	6
ppo00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

4328366

4337222

4341892

123054922

123148884

123166253

123403345

123412436

123431035

100833033

100834864

100835417

103645068

100193840

100286337

8076086

8079587

8063777

824184

836856

100817866

100790865

100784765

101244631

101267962

101257020

103829528

103840933

100267469

100259508

7462596

7476398

7490049

25494449

25494450

25493480

107945484

107913220

107908891

106394687

106366785

106391069

102583189

102581006

102589163

102614473

102625331

107790336

107793555

107803998

The preparation time of this page was 0.2 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	3	3	3	3	2	3	3	2	2	3	3	3	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4328366 (osa-e.1 coexpression data)

Top 50 enrichment test to 4328366 (osa-e.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**