ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-e.1	4332202	uncharacterized LOC4332202
osa-u.5	4332202	uncharacterized LOC4332202
osa-r.6	4332202	uncharacterized LOC4332202
osa-m.8	4332202	uncharacterized LOC4332202
tae-r.2	123098109	uncharacterized LOC123098109
tae-r.2	123085211	uncharacterized LOC123085211
tae-r.2	123092818	uncharacterized LOC123092818
hvu-r.1	123449191	uncharacterized LOC123449191
bdi-r.1	100826696	uncharacterized LOC100826696
zma-u.5	103639375	uncharacterized LOC103639375
sbi-r.1	8056823	uncharacterized LOC8056823
ath-u.5	AT3G18310	TATA box-binding protein associated factor RNA polymerase I subunit C
gma-u.5	100797045	uncharacterized LOC100797045
bra-r.6	103869575	uncharacterized LOC103869575
vvi-u.5	104882767	hypothetical protein
ppo-u.5	7454009	uncharacterized LOC7454009
mtr-u.5	11410330	uncharacterized LOC11410330
ghi-r.1	107898072	uncharacterized LOC107898072
ghi-r.1	107939860	uncharacterized LOC107939860
ghi-r.1	107941698	uncharacterized LOC107941698
bna-r.1	106436027	uncharacterized LOC106436027
bna-r.1	106451953	uncharacterized LOC106451953
sot-r.1	107057673	uncharacterized LOC107057673
cit-r.1	102613824	uncharacterized LOC102613824
nta-r.1	107774499	uncharacterized LOC107774499
nta-r.1	107785303	uncharacterized LOC107785303

Annotation

functional annotation

KEGG

GO BP

GO:0006360 [list] [network] transcription by RNA polymerase I

(14 genes)

IEA

GO CC

GO:0001650 [list] [network] fibrillar center

(2 genes)

IEA

GO MF

GO:0001164 [list] [network] RNA polymerase I core promoter sequence-specific DNA binding

(3 genes)

IEA

Protein

XP_015631832.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, vacu 1, cyto 1, mito 1, E.R._vacu 1

(predict for XP_015631832.1)

Subcellular
localization
TargetP

other 1

(predict for XP_015631832.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-e.1 for 4332202	osa-u.5 for 4332202	osa-r.6 for 4332202	osa-m.8 for 4332202	tae-r.2 for 123098109	tae-r.2 for 123085211	tae-r.2 for 123092818	hvu-r.1 for 123449191	bdi-r.1 for 100826696	zma-u.5 for 103639375	sbi-r.1 for 8056823	ath-u.5 for AT3G18310	gma-u.5 for 100797045	bra-r.6 for 103869575	vvi-u.5 for 104882767	ppo-u.5 for 7454009	mtr-u.5 for 11410330	ghi-r.1 for 107898072	ghi-r.1 for 107939860	ghi-r.1 for 107941698	bna-r.1 for 106436027	bna-r.1 for 106451953	sot-r.1 for 107057673	cit-r.1 for 102613824	nta-r.1 for 107774499	nta-r.1 for 107785303

Ortholog

Ortholog ID: 9490

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC4332202

uncharacterized LOC123098109

uncharacterized LOC123085211

uncharacterized LOC123092818

uncharacterized LOC123449191

uncharacterized LOC100826696

uncharacterized LOC103639375

uncharacterized LOC8056823

TATA box-binding protein associated factor RNA polymerase I subunit C

uncharacterized LOC100797045

uncharacterized LOC103869575

hypothetical protein

uncharacterized LOC7454009

uncharacterized LOC11410330

uncharacterized LOC107898072

uncharacterized LOC107939860

uncharacterized LOC107941698

uncharacterized LOC106436027

uncharacterized LOC106451953

uncharacterized LOC107057673

uncharacterized LOC102613824

uncharacterized LOC107774499

uncharacterized LOC107785303

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00630	Glyoxylate and dicarboxylate metabolism	6
ghi01200	Carbon metabolism	4
ghi00380	Tryptophan metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	7
cit03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

4332202

123098109

123085211

123092818

123449191

100826696

103639375

8056823

821360

100797045

103869575

104882767

7454009

11410330

107898072

107939860

107941698

106436027

106451953

107057673

102613824

107774499

107785303

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4332202 (osa-e.1 coexpression data)

Top 50 enrichment test to 4332202 (osa-e.1 coexpression data)


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	sly	cre
Paralog	4	3	1	1	1	1	1	1	1	1	1	1	3	2	1	1	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4332202 (osa-e.1 coexpression data)

Top 50 enrichment test to 4332202 (osa-e.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**