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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-e.1   4333612   protein FAR1-RELATED SEQUENCE 5 
 osa-u.5   4333612   protein FAR1-RELATED SEQUENCE 5 
 osa-r.6   4333612   protein FAR1-RELATED SEQUENCE 5 
 osa-m.8   4333612   protein FAR1-RELATED SEQUENCE 5 
 osa-u.5   9271013   protein FAR1-RELATED SEQUENCE 5 
 osa-u.5   9272421   protein FAR1-RELATED SEQUENCE 9 
 osa-u.5   4351811   protein FAR1-RELATED SEQUENCE 5 
 tae-r.2   123102513   protein FAR1-RELATED SEQUENCE 5 
 tae-r.2   123119668   protein FAR1-RELATED SEQUENCE 5 
 tae-r.2   123087363   protein FAR1-RELATED SEQUENCE 5 
 hvu-r.1   123446920   protein FAR1-RELATED SEQUENCE 5-like 
 hvu-r.1   123397094   protein FAR1-RELATED SEQUENCE 5-like 
 bdi-r.1   100844318   protein FAR1-RELATED SEQUENCE 5 
 zma-u.5   103626030   protein FAR1-RELATED SEQUENCE 5 
 zma-u.5   103643784   protein FAR1-RELATED SEQUENCE 5 
 sbi-r.1   8056771   protein FAR1-RELATED SEQUENCE 5 
 sbi-r.1   8070371   protein FAR1-RELATED SEQUENCE 5 
 ath-u.5   FRS3   FAR1-related sequence 3 
 ath-u.5   FRS9   FAR1-related sequence 9 
 ath-u.5   FRS5   FAR1-related sequence 5 
 gma-u.5   100793442   protein FAR1-RELATED SEQUENCE 5 
 gma-u.5   100789242   protein FAR1-RELATED SEQUENCE 3 
 gma-u.5   100788220   protein FAR1-RELATED SEQUENCE 5 
 sly-u.5   101250054   protein FAR1-RELATED SEQUENCE 3-like 
 sly-u.5   101254298   protein FAR1-RELATED SEQUENCE 5-like 
 sly-u.5   101258670   protein FAR1-RELATED SEQUENCE 9 
 bra-r.6   103858333   protein FAR1-RELATED SEQUENCE 3 
 bra-r.6   103857863   protein FAR1-RELATED SEQUENCE 5 
 bra-r.6   103834549   protein FAR1-RELATED SEQUENCE 9 
 vvi-u.5   100249541   protein FAR1-RELATED SEQUENCE 3 
 vvi-u.5   100244871   protein FAR1-RELATED SEQUENCE 3 
 vvi-u.5   100267671   protein FAR1-RELATED SEQUENCE 3 
 ppo-u.5   7460091   protein FAR1-RELATED SEQUENCE 3 
 ppo-u.5   7463350   protein FAR1-RELATED SEQUENCE 5 
 ppo-u.5   18098179   protein FAR1-RELATED SEQUENCE 9 
 mtr-u.5   112420389   protein FAR1-RELATED SEQUENCE 3 
 mtr-u.5   112421987   protein FAR1-RELATED SEQUENCE 3 
 ghi-r.1   107911829   protein FAR1-RELATED SEQUENCE 5 
 ghi-r.1   121215564   protein FAR1-RELATED SEQUENCE 3 
 ghi-r.1   107898892   protein FAR1-RELATED SEQUENCE 9 
 bna-r.1   125607142   protein FAR1-RELATED SEQUENCE 5-like 
 bna-r.1   106361129   protein FAR1-RELATED SEQUENCE 9 
 bna-r.1   106388401   protein FAR1-RELATED SEQUENCE 3-like 
 sot-r.1   102589611   protein FAR1-RELATED SEQUENCE 3 
 sot-r.1   102581498   protein FAR1-RELATED SEQUENCE 9 
 sot-r.1   102587778   protein FAR1-RELATED SEQUENCE 5-like 
 cit-r.1   102628464   protein FAR1-RELATED SEQUENCE 9 
 cit-r.1   102628171   protein FAR1-RELATED SEQUENCE 5 
 cit-r.1   102611961   protein FAR1-RELATED SEQUENCE 5 
 nta-r.1   107797540   protein FAR1-RELATED SEQUENCE 5 
 nta-r.1   107784681   protein FAR1-RELATED SEQUENCE 5-like 
 nta-r.1   107776498   protein FAR1-RELATED SEQUENCE 5 

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Top 50 coexpressed genes to 4333612 (osa-e.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4333612 (osa-e.1 coexpression data)

CoexMap"4333612"


osaLOC4333612 | Entrez gene ID : 4333612      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 7 3 2 1 2 2 3 3 3 3 3 3 2 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1615 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (840 genes)  IEA  
Protein XP_015631605.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_015631605.1)
Subcellular
localization
TargetP
other 9  (predict for XP_015631605.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-e.1
for
4333612
osa-u.5
for
4333612
osa-r.6
for
4333612
osa-m.8
for
4333612
osa-u.5
for
9271013
osa-u.5
for
9272421
osa-u.5
for
4351811
tae-r.2
for
123102513
tae-r.2
for
123119668
tae-r.2
for
123087363
hvu-r.1
for
123446920
hvu-r.1
for
123397094
bdi-r.1
for
100844318
zma-u.5
for
103626030
zma-u.5
for
103643784
sbi-r.1
for
8056771
sbi-r.1
for
8070371
ath-u.5
for
FRS3
ath-u.5
for
FRS9
ath-u.5
for
FRS5
gma-u.5
for
100793442
gma-u.5
for
100789242
gma-u.5
for
100788220
sly-u.5
for
101250054
sly-u.5
for
101254298
sly-u.5
for
101258670
bra-r.6
for
103858333
bra-r.6
for
103857863
bra-r.6
for
103834549
vvi-u.5
for
100249541
vvi-u.5
for
100244871
vvi-u.5
for
100267671
ppo-u.5
for
7460091
ppo-u.5
for
7463350
ppo-u.5
for
18098179
mtr-u.5
for
112420389
mtr-u.5
for
112421987
ghi-r.1
for
107911829
ghi-r.1
for
121215564
ghi-r.1
for
107898892
bna-r.1
for
125607142
bna-r.1
for
106361129
bna-r.1
for
106388401
sot-r.1
for
102589611
sot-r.1
for
102581498
sot-r.1
for
102587778
cit-r.1
for
102628464
cit-r.1
for
102628171
cit-r.1
for
102611961
nta-r.1
for
107797540
nta-r.1
for
107784681
nta-r.1
for
107776498


Ortholog ID: 915
Species osa osa osa tae tae hvu hvu bdi zma zma sbi sbi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta
Symbol LOC4333612 LOC9272421 LOC4351811 LOC123087363 LOC123110661 LOC123446920 LOC123397094 LOC100844318 LOC103626030 LOC103643784 LOC8056771 LOC8070371 FRS3 FRS9 FRS5 LOC100786516 LOC100786206 LOC100782414 LOC101250054 LOC101254298 LOC101260088 LOC103858333 LOC103857863 LOC103834549 LOC100244871 LOC100267671 LOC100259892 LOC18098179 LOC18098178 LOC18099716 LOC112420389 LOC112421972 LOC107898892 LOC107927583 LOC121224218 LOC106361129 LOC111204752 LOC106438417 LOC102587778 LOC102591759 LOC102596648 LOC102628171 LOC102626670 LOC102626563 LOC107797540 LOC107805239 LOC107807050
Function* protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 FAR1-related sequence 3 FAR1-related sequence 9 FAR1-related sequence 5 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3-like protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 9 protein FAR1-RELATED SEQUENCE 9-like protein FAR1-RELATED SEQUENCE 3-like protein FAR1-RELATED SEQUENCE 5-like protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3-like protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3-like protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 3 protein FAR1-RELATED SEQUENCE 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae00310 Lysine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 3
mtr04070 Phosphatidylinositol signaling system 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03013 Nucleocytoplasmic transport 5
ghi03015 mRNA surveillance pathway 5
ghi03440 Homologous recombination 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03430 Mismatch repair 6
bna03030 DNA replication 4
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00240 Pyrimidine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta04075 Plant hormone signal transduction 2
nta00310 Lysine degradation 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4333612 9272421 4351811 123087363 123110661 123446920 123397094 100844318 103626030 103643784 8056771 8070371 817253 829973 829974 100786516 100786206 100782414 101250054 101254298 101260088 103858333 103857863 103834549 100244871 100267671 100259892 18098179 18098178 18099716 112420389 112421972 107898892 107927583 121224218 106361129 111204752 106438417 102587778 102591759 102596648 102628171 102626670 102626563 107797540 107805239 107807050
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