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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-e.1  4334555  large ribosomal subunit protein bL17c 
 osa-u.5  4334555  large ribosomal subunit protein bL17c 
 osa-r.6  4334555  large ribosomal subunit protein bL17c 
 osa-m.8  4334555  large ribosomal subunit protein bL17c 
 tae-r.2  123123430  50S ribosomal protein L17, chloroplastic 
 tae-r.2  123113926  50S ribosomal protein L17, chloroplastic 
 tae-r.2  123105607  50S ribosomal protein L17, chloroplastic 
 hvu-r.1  123452954  50S ribosomal protein L17, chloroplastic 
 bdi-r.1  100843749  50S ribosomal protein L17, chloroplastic 
 zma-u.5  100274150  50S ribosomal protein L17, chloroplastic-like 
 sbi-r.1  8057389  50S ribosomal protein L17, chloroplastic 
 ath-u.5  AT3G54210  Ribosomal protein L17 family protein 
 gma-u.5  100779016  50S ribosomal protein L17, chloroplastic 
 gma-u.5  100500099  uncharacterized LOC100500099 
 sly-u.5  101267247  large ribosomal subunit protein bL17c 
 sly-u.5  101266952  large ribosomal subunit protein bL17c 
 bra-r.6  103841337  50S ribosomal protein L17, chloroplastic 
 bra-r.6  103829970  50S ribosomal protein L17, chloroplastic 
 vvi-u.5  100263106  large ribosomal subunit protein bL17c 
 ppo-u.5  18100043  50S ribosomal protein L17, chloroplastic 
 ppo-u.5  7472504  50S ribosomal protein L17, chloroplastic 
 mtr-u.5  25489166  50S ribosomal protein L17, chloroplastic 
 ghi-r.1  107909039  50S ribosomal protein L17, chloroplastic 
 ghi-r.1  107938672  50S ribosomal protein L17, chloroplastic 
 bna-r.1  106415674  50S ribosomal protein L17, chloroplastic 
 bna-r.1  106353684  50S ribosomal protein L17, chloroplastic-like 
 bna-r.1  106353683  50S ribosomal protein L17, chloroplastic 
 sot-r.1  102586592  50S ribosomal protein L17, chloroplastic-like 
 sot-r.1  102586267  50S ribosomal protein L17, chloroplastic 
 cit-r.1  102623176  50S ribosomal protein L17, chloroplastic 
 nta-r.1  107821645  50S ribosomal protein L17, chloroplastic 
 nta-r.1  107779789  large ribosomal subunit protein bL17c-like 
 nta-r.1  107771075  large ribosomal subunit protein bL17c-like 
 cre-r.1  CHLRE_02g108850v5  uncharacterized protein 

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Top 50 coexpressed genes to 4334555 (osa-e.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334555 (osa-e.1 coexpression data)

CoexMap"4334555"


osaLOC4334555 | Entrez gene ID : 4334555
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 1 1 1 1 1 2 2 2 1 2 1 2 3 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa03010 [list] [network] Ribosome (386 genes)
GO BP
GO:0006412 [list] [network] translation  (521 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (132 genes)  IEA  
GO:0005840 [list] [network] ribosome  (360 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (352 genes)  IEA  
Protein XP_015630559.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_015630559.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_015630559.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-e.1
for
4334555


osa-u.5
for
4334555


osa-r.6
for
4334555


osa-m.8
for
4334555


tae-r.2
for
123123430


tae-r.2
for
123113926


tae-r.2
for
123105607


hvu-r.1
for
123452954


bdi-r.1
for
100843749


zma-u.5
for
100274150


sbi-r.1
for
8057389


ath-u.5
for
AT3G54210


gma-u.5
for
100779016


gma-u.5
for
100500099


sly-u.5
for
101267247


sly-u.5
for
101266952


bra-r.6
for
103841337


bra-r.6
for
103829970


vvi-u.5
for
100263106


ppo-u.5
for
18100043


ppo-u.5
for
7472504


mtr-u.5
for
25489166


ghi-r.1
for
107909039


ghi-r.1
for
107938672


bna-r.1
for
106415674


bna-r.1
for
106353684


bna-r.1
for
106353683


sot-r.1
for
102586592


sot-r.1
for
102586267


cit-r.1
for
102623176


nta-r.1
for
107821645


nta-r.1
for
107779789


nta-r.1
for
107771075


cre-r.1
for
CHLRE_02g108850v5



Ortholog ID: 6584
Species osa tae tae tae hvu bdi zma sbi ath gma gma sly sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot sot cit nta nta nta cre
Symbol LOC4334555 LOC123123430 LOC123113926 LOC123105607 LOC123452954 LOC100843749 LOC100274150 LOC8057389 AT3G54210 LOC100779016 LOC100500099 LOC101267247 LOC101266952 LOC103841337 LOC103829970 LOC100263106 LOC18100043 LOC7472504 LOC25489166 LOC107909039 LOC107938672 LOC106353684 LOC106353683 LOC106415418 LOC102586592 LOC102586267 LOC102623176 LOC107821645 LOC107779789 LOC107771075 CHLRE_02g108850v5
Function* large ribosomal subunit protein bL17c 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic-like 50S ribosomal protein L17, chloroplastic Ribosomal protein L17 family protein 50S ribosomal protein L17, chloroplastic uncharacterized LOC100500099 large ribosomal subunit protein bL17c large ribosomal subunit protein bL17c 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic large ribosomal subunit protein bL17c 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic-like 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic-like 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic large ribosomal subunit protein bL17c-like large ribosomal subunit protein bL17c-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4334555 123123430 123113926 123105607 123452954 100843749 100274150 8057389 824588 100779016 100500099 101267247 101266952 103841337 103829970 100263106 18100043 7472504 25489166 107909039 107938672 106353684 106353683 106415418 102586592 102586267 102623176 107821645 107779789 107771075 5725269
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