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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-e.1   4334580   40S ribosomal protein S23 
 osa-u.5   4334580   40S ribosomal protein S23 
 osa-r.6   4334580   40S ribosomal protein S23 
 osa-u.5   4348383   small ribosomal subunit protein uS12 
 osa-u.5   4327414   40S ribosomal protein S23 
 osa-u.5   9266509   40S ribosomal protein S23 
 tae-r.2   123059459   40S ribosomal protein S23 
 tae-r.2   123062506   40S ribosomal protein S23 
 tae-r.2   123071316   40S ribosomal protein S23 
 hvu-r.1   123453009   40S ribosomal protein S23 
 hvu-r.1   123445205   40S ribosomal protein S23 
 hvu-r.1   123444968   40S ribosomal protein S23 
 bdi-r.1   100832317   40S ribosomal protein S23 
 bdi-r.1   100832951   40S ribosomal protein S23 
 zma-u.5   100192600   40S ribosomal protein S23 
 zma-u.5   103625771   40S ribosomal protein S23-like 
 zma-u.5   103630443   40S ribosomal protein S23 
 sbi-r.1   8057378   40S ribosomal protein S23 
 sbi-r.1   8072558   40S ribosomal protein S23 
 sbi-r.1   8085434   40S ribosomal protein S23 
 ath-u.5   AT3G09680   Ribosomal protein S12/S23 family protein 
 ath-u.5   AT5G02960   Ribosomal protein S12/S23 family protein 
 gma-u.5   100500013   40S ribosomal protein S23 
 gma-u.5   100306064   40S ribosomal protein S23 
 gma-u.5   100776345   40S ribosomal protein S23-like 
 sly-u.5   101257002   small ribosomal subunit protein uS12 
 sly-u.5   101252449   small ribosomal subunit protein uS12 
 sly-u.5   101252131   40S ribosomal protein S23 
 bra-r.6   103847414   40S ribosomal protein S23-2 
 bra-r.6   103859285   40S ribosomal protein S23-2 
 vvi-u.5   100265528   small ribosomal subunit protein uS12 
 vvi-u.5   100248226   small ribosomal subunit protein uS12 
 vvi-u.5   100242825   small ribosomal subunit protein uS12 
 ppo-u.5   7465301   40S ribosomal protein S23 
 ppo-u.5   7457888   40S ribosomal protein S23 
 ppo-u.5   7489626   40S ribosomal protein S23 
 mtr-u.5   11434751   40S ribosomal protein S23-2 
 mtr-u.5   25484043   40S ribosomal protein S23 
 ghi-r.1   107891106   40S ribosomal protein S23 
 ghi-r.1   107905281   40S ribosomal protein S23 
 ghi-r.1   107916681   40S ribosomal protein S23 
 bna-r.1   125581363   40S ribosomal protein S23-2 
 bna-r.1   106427936   40S ribosomal protein S23-2 
 bna-r.1   106424083   40S ribosomal protein S23-2 
 sot-r.1   102606349   40S ribosomal protein S23 
 sot-r.1   102577739   uncharacterized LOC102577739 
 sot-r.1   102582696   40S ribosomal protein S23 
 cit-r.1   102622281   40S ribosomal protein S23 
 cit-r.1   102627205   40S ribosomal protein S23 
 nta-r.1   107799116   small ribosomal subunit protein uS12 
 nta-r.1   107775858   small ribosomal subunit protein uS12 
 nta-r.1   107831185   small ribosomal subunit protein uS12 
 cre-r.1   CHLRE_12g504200v5   ribosomal protein S23 

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Top 50 coexpressed genes to 4334580 (osa-e.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334580 (osa-e.1 coexpression data)

CoexMap"4334580"


osaLOC4334580 | Entrez gene ID : 4334580    
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 6 3 3 2 3 3 2 3 3 2 3 3 2 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa03010 [list] [network] Ribosome (386 genes)
GO BP
GO:0006412 [list] [network] translation  (521 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (74 genes)  IEA  
GO:0005840 [list] [network] ribosome  (360 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (352 genes)  IEA  
Protein NP_001405871.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for NP_001405871.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001405871.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-e.1
for
4334580
osa-u.5
for
4334580
osa-r.6
for
4334580
osa-u.5
for
4348383
osa-u.5
for
4327414
osa-u.5
for
9266509
tae-r.2
for
123059459
tae-r.2
for
123062506
tae-r.2
for
123071316
hvu-r.1
for
123453009
hvu-r.1
for
123445205
hvu-r.1
for
123444968
bdi-r.1
for
100832317
bdi-r.1
for
100832951
zma-u.5
for
100192600
zma-u.5
for
103625771
zma-u.5
for
103630443
sbi-r.1
for
8057378
sbi-r.1
for
8072558
sbi-r.1
for
8085434
ath-u.5
for
AT3G09680
ath-u.5
for
AT5G02960
gma-u.5
for
100500013
gma-u.5
for
100306064
gma-u.5
for
100776345
sly-u.5
for
101257002
sly-u.5
for
101252449
sly-u.5
for
101252131
bra-r.6
for
103847414
bra-r.6
for
103859285
vvi-u.5
for
100265528
vvi-u.5
for
100248226
vvi-u.5
for
100242825
ppo-u.5
for
7465301
ppo-u.5
for
7457888
ppo-u.5
for
7489626
mtr-u.5
for
11434751
mtr-u.5
for
25484043
ghi-r.1
for
107891106
ghi-r.1
for
107905281
ghi-r.1
for
107916681
bna-r.1
for
125581363
bna-r.1
for
106427936
bna-r.1
for
106424083
sot-r.1
for
102606349
sot-r.1
for
102577739
sot-r.1
for
102582696
cit-r.1
for
102622281
cit-r.1
for
102627205
nta-r.1
for
107799116
nta-r.1
for
107775858
nta-r.1
for
107831185
cre-r.1
for
CHLRE_12g504200v5


Ortholog ID: 1202
Species osa osa osa tae tae tae hvu hvu hvu bdi bdi zma zma zma sbi sbi sbi ath ath gma gma gma sly sly sly bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre
Symbol LOC4334580 LOC4348383 LOC9266509 LOC123059459 LOC123123461 LOC123136323 LOC123453009 LOC123445205 LOC123398301 LOC100832317 LOC100832951 LOC103625771 LOC101027156 LOC103644248 LOC8057378 LOC8072558 LOC8085434 AT3G09680 AT5G02960 LOC100500013 LOC100306064 LOC100796694 LOC101257002 LOC101252449 LOC101252131 LOC103859285 LOC103848030 LOC100265528 LOC100248226 LOC100242825 LOC7465301 LOC7489626 LOC18100230 LOC11434751 LOC25484043 LOC107905281 LOC121230463 LOC107904092 LOC106424083 LOC106372613 LOC106439190 LOC102606349 LOC102577739 LOC102589849 LOC102622281 LOC102627205 LOC107799116 LOC107811880 LOC107812875 CHLRE_12g504200v5
Function* 40S ribosomal protein S23 small ribosomal subunit protein uS12 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23-like 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 Ribosomal protein S12/S23 family protein Ribosomal protein S12/S23 family protein 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 small ribosomal subunit protein uS12 small ribosomal subunit protein uS12 40S ribosomal protein S23 40S ribosomal protein S23-2 40S ribosomal protein S23-2 small ribosomal subunit protein uS12 small ribosomal subunit protein uS12 small ribosomal subunit protein uS12 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23-2 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23-2 40S ribosomal protein S23-2 40S ribosomal protein S23-2 40S ribosomal protein S23 uncharacterized LOC102577739 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 small ribosomal subunit protein uS12 small ribosomal subunit protein uS12 small ribosomal subunit protein uS12 ribosomal protein S23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00261 Monobactam biosynthesis 3
ghi00300 Lysine biosynthesis 3
ghi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
nta04120 Ubiquitin mediated proteolysis 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
nta03018 RNA degradation 3
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4334580 4348383 9266509 123059459 123123461 123136323 123453009 123445205 123398301 100832317 100832951 103625771 101027156 103644248 8057378 8072558 8085434 820125 831724 100500013 100306064 100796694 101257002 101252449 101252131 103859285 103848030 100265528 100248226 100242825 7465301 7489626 18100230 11434751 25484043 107905281 121230463 107904092 106424083 106372613 106439190 102606349 102577739 102589849 102622281 102627205 107799116 107811880 107812875 5716444
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