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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-e.1   4336972   polygalacturonase QRT3 
 osa-u.5   4336972   polygalacturonase QRT3 
 osa-r.6   4336972   polygalacturonase QRT3 
 osa-m.8   4336972   polygalacturonase QRT3 
 tae-r.2   123190195   polygalacturonase QRT3 
 tae-r.2   123054309   polygalacturonase QRT3 
 tae-r.2   123046460   polygalacturonase QRT3 
 hvu-r.1   123427624   polygalacturonase QRT3-like 
 bdi-r.1   100831409   polygalacturonase QRT3 
 zma-u.5   100191933   Polygalacturonase QRT3 
 sbi-r.1   8072332   polygalacturonase QRT3 
 ath-u.5   QRT3   Pectin lyase-like superfamily protein 
 gma-u.5   100804107   polygalacturonase QRT3 
 gma-u.5   100798726   polygalacturonase QRT3 
 sly-u.5   101265794   polygalacturonase QRT3 
 bra-r.6   103857931   polygalacturonase QRT3 
 vvi-u.5   100242282   polygalacturonase QRT3 
 ppo-u.5   7471614   polygalacturonase QRT3 
 mtr-u.5   11442760   polygalacturonase QRT3 
 mtr-u.5   25495409   polygalacturonase QRT3 
 ghi-r.1   121214870   polygalacturonase QRT3 
 bna-r.1   106365935   polygalacturonase QRT3-like 
 bna-r.1   106437332   polygalacturonase QRT3 
 sot-r.1   102606287   polygalacturonase QRT3 
 cit-r.1   102618465   polygalacturonase QRT3-like 
 cit-r.1   107175138   polygalacturonase QRT3-like 
 cit-r.1   102625680   polygalacturonase QRT3 
 nta-r.1   107781885   polygalacturonase QRT3 

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Top 50 coexpressed genes to 4336972 (osa-e.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4336972 (osa-e.1 coexpression data)

CoexMap"4336972"


osaLOC4336972 | Entrez gene ID : 4336972      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 1 1 1 1 1 2 1 1 1 1 2 1 2 1 3 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (43 genes)  IEA  
Protein XP_015634183.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  cyto_plas 4,  cyto 2,  chlo 1,  E.R. 1  (predict for XP_015634183.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_015634183.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-e.1
for
4336972
osa-u.5
for
4336972
osa-r.6
for
4336972
osa-m.8
for
4336972
tae-r.2
for
123190195
tae-r.2
for
123054309
tae-r.2
for
123046460
hvu-r.1
for
123427624
bdi-r.1
for
100831409
zma-u.5
for
100191933
sbi-r.1
for
8072332
ath-u.5
for
QRT3
gma-u.5
for
100804107
gma-u.5
for
100798726
sly-u.5
for
101265794
bra-r.6
for
103857931
vvi-u.5
for
100242282
ppo-u.5
for
7471614
mtr-u.5
for
11442760
mtr-u.5
for
25495409
ghi-r.1
for
121214870
bna-r.1
for
106365935
bna-r.1
for
106437332
sot-r.1
for
102606287
cit-r.1
for
102618465
cit-r.1
for
107175138
cit-r.1
for
102625680
nta-r.1
for
107781885


Ortholog ID: 8545
Species osa tae tae tae hvu bdi zma sbi ath gma gma sly bra vvi ppo mtr mtr ghi bna bna sot cit cit cit nta
Symbol LOC4336972 LOC123190195 LOC123054309 LOC123046460 LOC123427624 LOC100831409 LOC100191933 LOC8072332 QRT3 LOC100804107 LOC100798726 LOC101265794 LOC103857931 LOC100242282 LOC7471614 LOC11442760 LOC25495409 LOC121214870 LOC106365935 LOC106437332 LOC102606287 LOC102618465 LOC107175138 LOC102625680 LOC107781885
Function* polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3-like polygalacturonase QRT3 Polygalacturonase QRT3 polygalacturonase QRT3 Pectin lyase-like superfamily protein polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3-like polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3-like polygalacturonase QRT3-like polygalacturonase QRT3 polygalacturonase QRT3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae00010 Glycolysis / Gluconeogenesis 2
tae00620 Pyruvate metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 4
zma00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
gma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
sot00941 Flavonoid biosynthesis 2
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta04626 Plant-pathogen interaction 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4336972 123190195 123054309 123046460 123427624 100831409 100191933 8072332 827750 100804107 100798726 101265794 103857931 100242282 7471614 11442760 25495409 121214870 106365935 106437332 102606287 102618465 107175138 102625680 107781885
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