ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-e.1	4337065	flocculation protein FLO11
osa-u.5	4337065	flocculation protein FLO11
osa-r.6	4337065	flocculation protein FLO11
osa-m.8	4337065	flocculation protein FLO11
tae-r.2	123190504	uncharacterized LOC123190504
tae-r.2	123054657	uncharacterized LOC123054657
tae-r.2	123046802	uncharacterized LOC123046802
hvu-r.1	123427910	uncharacterized LOC123427910
bdi-r.1	100834150	uncharacterized LOC100834150
zma-u.5	100192981	uncharacterized LOC100192981
zma-u.5	100277366	uncharacterized LOC100277366
sbi-r.1	8066819	uncharacterized LOC8066819
ath-u.5	AT4G26990	polyadenylate-binding protein interacting protein
ath-u.5	AT5G54920	polyadenylate-binding protein interacting protein
gma-u.5	100809285	ataxin-2 homolog
gma-u.5	100794683	nuclear pore complex protein DDB_G0274915
sly-u.5	101250136	uncharacterized LOC101250136
bra-r.6	103866729	uncharacterized LOC103866729
bra-r.6	103861666	uncharacterized LOC103861666
vvi-u.5	104877589	polyadenylate-binding protein-interacting protein 4
ppo-u.5	18095972	uncharacterized LOC18095972
ppo-u.5	7454436	polyadenylate-binding protein-interacting protein 4
mtr-u.5	11437984	uncharacterized LOC11437984
ghi-r.1	107903329	polyadenylate-binding protein-interacting protein 4
ghi-r.1	107903379	polyadenylate-binding protein-interacting protein 4
bna-r.1	106445502	uncharacterized LOC106445502
bna-r.1	BNAA01G16050D	uncharacterized BNAA01G16050D
sot-r.1	102582956	uncharacterized LOC102582956
cit-r.1	102617677	polyadenylate-binding protein-interacting protein 4
nta-r.1	107829219	uncharacterized LOC107829219
nta-r.1	107831078	uncharacterized LOC107831078

Annotation

functional annotation

KEGG

GO BP

GO:0034063 [list] [network] stress granule assembly

(7 genes)

IEA

GO CC

GO:0010494 [list] [network] cytoplasmic stress granule

(6 genes)

IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(333 genes)

IEA

Protein

XP_015633826.2 [sequence] [blastp]
XP_015633827.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 3, cyto 2, nucl 1, golg 1	(predict for XP_015633826.2)
chlo 4, mito 3, cyto 2, nucl 1, golg 1	(predict for XP_015633827.2)

Subcellular
localization
TargetP

chlo 8	(predict for XP_015633826.2)
chlo 8	(predict for XP_015633827.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-e.1 for 4337065	osa-u.5 for 4337065	osa-r.6 for 4337065	osa-m.8 for 4337065	tae-r.2 for 123190504	tae-r.2 for 123054657	tae-r.2 for 123046802	hvu-r.1 for 123427910	bdi-r.1 for 100834150	zma-u.5 for 100192981	zma-u.5 for 100277366	sbi-r.1 for 8066819	ath-u.5 for AT4G26990	ath-u.5 for AT5G54920	gma-u.5 for 100809285	gma-u.5 for 100794683	sly-u.5 for 101250136	bra-r.6 for 103866729	bra-r.6 for 103861666	vvi-u.5 for 104877589	ppo-u.5 for 18095972	ppo-u.5 for 7454436	mtr-u.5 for 11437984	ghi-r.1 for 107903329	ghi-r.1 for 107903379	bna-r.1 for 106445502	bna-r.1 for BNAA01G16050D	sot-r.1 for 102582956	cit-r.1 for 102617677	nta-r.1 for 107829219	nta-r.1 for 107831078

Ortholog

Ortholog ID: 8102

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

flocculation protein FLO11

uncharacterized LOC123190504

uncharacterized LOC123054657

uncharacterized LOC123046802

uncharacterized LOC123427910

uncharacterized LOC100834150

uncharacterized LOC100192981

uncharacterized LOC100277366

uncharacterized LOC8066819

polyadenylate-binding protein interacting protein

ataxin-2 homolog

nuclear pore complex protein DDB_G0274915

uncharacterized LOC101250136

uncharacterized LOC103866729

uncharacterized LOC103861666

polyadenylate-binding protein-interacting protein 4

uncharacterized LOC18095972

polyadenylate-binding protein-interacting protein 4

uncharacterized LOC11437984

polyadenylate-binding protein-interacting protein 4

uncharacterized LOC106445502

uncharacterized BNAA01G16050D

uncharacterized LOC102582956

polyadenylate-binding protein-interacting protein 4

uncharacterized LOC107829219

uncharacterized LOC107831078

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00071	Fatty acid degradation	2
hvu01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	4
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00230	Purine metabolism	2
zma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma01232	Nucleotide metabolism	2
zma04016	MAPK signaling pathway - plant	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath03050	Proteasome	4
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	4
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	7
bra04144	Endocytosis	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo00541	Biosynthesis of various nucleotide sugars	3
ppo01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	2
mtr01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	3
bna04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	3
bna04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00030	Pentose phosphate pathway	2
nta00051	Fructose and mannose metabolism	2
nta00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2
nta04141	Protein processing in endoplasmic reticulum	2
nta00040	Pentose and glucuronate interconversions	2

Expression

Expression pattern

Entrez Gene ID^*

4337065

123190504

123054657

123046802

123427910

100834150

100192981

100277366

8066819

828807

835583

100809285

100794683

101250136

103866729

103861666

104877589

18095972

7454436

11437984

107903329

107903379

106445502

106444873

102582956

102617677

107829219

107831078

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4337065 (osa-e.1 coexpression data)

Top 50 enrichment test to 4337065 (osa-e.1 coexpression data)


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	1	1	2	1	2	2	1	2	1	2	1	2	2	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4337065 (osa-e.1 coexpression data)

Top 50 enrichment test to 4337065 (osa-e.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**