ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-e.1	4337424	E3 ubiquitin-protein ligase AIRP2-like
osa-u.5	4337424	E3 ubiquitin-protein ligase AIRP2-like
osa-r.6	4337424	E3 ubiquitin-protein ligase AIRP2-like
osa-m.8	4337424	E3 ubiquitin-protein ligase AIRP2-like
osa-u.5	4325026	E3 ubiquitin-protein ligase AIRP2
osa-u.5	9269562	E3 ubiquitin-protein ligase AIRP2
osa-u.5	4342914	E3 ubiquitin-protein ligase AIRP2
tae-r.2	123043842	E3 ubiquitin-protein ligase AIRP2
tae-r.2	123047232	E3 ubiquitin-protein ligase AIRP2
tae-r.2	123079992	E3 ubiquitin-protein ligase AIRP2
hvu-r.1	123445017	E3 ubiquitin-protein ligase AIRP2-like
hvu-r.1	123429876	E3 ubiquitin-protein ligase AIRP2-like
hvu-r.1	123433081	E3 ubiquitin-protein ligase AIRP2-like
bdi-r.1	100824973	E3 ubiquitin-protein ligase AIRP2
bdi-r.1	100827242	E3 ubiquitin-protein ligase AIRP2
bdi-r.1	100837800	E3 ubiquitin-protein ligase AIRP2
zma-u.5	100282914	RNA-binding protein
zma-u.5	100281234	RNA-binding protein
sbi-r.1	8085881	uncharacterized LOC8085881
sbi-r.1	110433320	RING finger protein 141-like
sbi-r.1	110432334	uncharacterized LOC110432334
ath-u.5	AT3G47160	RING/U-box superfamily protein
ath-u.5	AIRP2	RING/U-box superfamily protein
ath-u.5	AT5G58787	RING/U-box superfamily protein
gma-u.5	100809811	E3 ubiquitin-protein ligase AIRP2
gma-u.5	100811330	E3 ubiquitin-protein ligase AIRP2
gma-u.5	100812518	uncharacterized LOC100812518
sly-u.5	101255095	E3 ubiquitin-protein ligase AIRP2
sly-u.5	101248144	E3 ubiquitin-protein ligase AIRP2-like
sly-u.5	101258938	E3 ubiquitin-protein ligase AIRP2-like
bra-r.6	103873258	E3 ubiquitin-protein ligase AIRP2
bra-r.6	103835423	E3 ubiquitin-protein ligase AIRP2
bra-r.6	103871954	E3 ubiquitin-protein ligase AIRP2
vvi-u.5	100261401	E3 ubiquitin-protein ligase AIRP2
vvi-u.5	104879530	E3 ubiquitin-protein ligase AIRP2
vvi-u.5	100251822	E3 ubiquitin-protein ligase AIRP2
ppo-u.5	7477415	E3 ubiquitin-protein ligase AIRP2
ppo-u.5	18103005	E3 ubiquitin-protein ligase AIRP2
mtr-u.5	11410065	E3 ubiquitin-protein ligase AIRP2
mtr-u.5	11420407	E3 ubiquitin-protein ligase AIRP2
mtr-u.5	11424918	E3 ubiquitin-protein ligase AIRP2
ghi-r.1	107928656	E3 ubiquitin-protein ligase AIRP2
ghi-r.1	107925285	E3 ubiquitin-protein ligase AIRP2
ghi-r.1	107918261	E3 ubiquitin-protein ligase AIRP2
bna-r.1	125602912	E3 ubiquitin-protein ligase AIRP2-like
bna-r.1	BNAC03G00220D	E3 ubiquitin-protein ligase AIRP2
bna-r.1	106412368	E3 ubiquitin-protein ligase AIRP2-like
sot-r.1	102584135	uncharacterized LOC102584135
sot-r.1	102579322	RING-H2 finger protein ATL47-like
sot-r.1	102593857	E3 ubiquitin-protein ligase RNF8-A-like
cit-r.1	102628251	E3 ubiquitin-protein ligase AIRP2
cit-r.1	102608182	hypothetical protein
cit-r.1	102609216	E3 ubiquitin-protein ligase AIRP2-like
nta-r.1	107806024	E3 ubiquitin-protein ligase AIRP2-like
nta-r.1	107761457	E3 ubiquitin-protein ligase AIRP2
nta-r.1	107761259	E3 ubiquitin-protein ligase AIRP2-like

Top 50 coexpressed genes to 4337424 (osa-e.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4337424 (osa-e.1 coexpression data)

CoexMap"4337424"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(501 genes)

IEA

GO CC

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity

(229 genes)

IEA

Protein

XP_025880557.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, mito 1, chlo 1, cyto 1, cysk 1, cyto_mito 1, mito_plas 1

(predict for XP_025880557.2)

Subcellular
localization
TargetP

other 7, scret 3

(predict for XP_025880557.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-e.1 for 4337424	osa-u.5 for 4337424	osa-r.6 for 4337424	osa-m.8 for 4337424	osa-u.5 for 4325026	osa-u.5 for 9269562	osa-u.5 for 4342914	tae-r.2 for 123043842	tae-r.2 for 123047232	tae-r.2 for 123079992	hvu-r.1 for 123445017	hvu-r.1 for 123429876	hvu-r.1 for 123433081	bdi-r.1 for 100824973	bdi-r.1 for 100827242	bdi-r.1 for 100837800	zma-u.5 for 100282914	zma-u.5 for 100281234	sbi-r.1 for 8085881	sbi-r.1 for 110433320	sbi-r.1 for 110432334	ath-u.5 for AT3G47160	ath-u.5 for AIRP2	ath-u.5 for AT5G58787	gma-u.5 for 100809811	gma-u.5 for 100811330	gma-u.5 for 100812518	sly-u.5 for 101255095	sly-u.5 for 101248144	sly-u.5 for 101258938	bra-r.6 for 103873258	bra-r.6 for 103835423	bra-r.6 for 103871954	vvi-u.5 for 100261401	vvi-u.5 for 104879530	vvi-u.5 for 100251822	ppo-u.5 for 7477415	ppo-u.5 for 18103005	mtr-u.5 for 11410065	mtr-u.5 for 11420407	mtr-u.5 for 11424918	ghi-r.1 for 107928656	ghi-r.1 for 107925285	ghi-r.1 for 107918261	bna-r.1 for 125602912	bna-r.1 for BNAC03G00220D	bna-r.1 for 106412368	sot-r.1 for 102584135	sot-r.1 for 102579322	sot-r.1 for 102593857	cit-r.1 for 102628251	cit-r.1 for 102608182	cit-r.1 for 102609216	nta-r.1 for 107806024	nta-r.1 for 107761457	nta-r.1 for 107761259

Ortholog

Ortholog ID: 363

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

AIRP2

Function^*

E3 ubiquitin-protein ligase AIRP2-like

E3 ubiquitin-protein ligase AIRP2

E3 ubiquitin-protein ligase AIRP2-like

E3 ubiquitin-protein ligase AIRP2

RNA-binding protein

putative RING zinc finger domain superfamily protein

RING finger protein 141-like

uncharacterized LOC8067091

uncharacterized LOC8072264

RING/U-box superfamily protein

E3 ubiquitin-protein ligase AIRP2

RING Zn-finger domain-containing protein

E3 ubiquitin-protein ligase AIRP2

E3 ubiquitin-protein ligase AIRP2-like

E3 ubiquitin-protein ligase AIRP2

hypothetical protein

E3 ubiquitin-protein ligase AIRP2

uncharacterized LOC102584135

E3 ubiquitin-protein ligase RNF8-A-like

E3 ubiquitin-protein ligase RNF8-like

hypothetical protein

E3 ubiquitin-protein ligase AIRP2-like

hypothetical protein

E3 ubiquitin-protein ligase AIRP2-like

E3 ubiquitin-protein ligase AIRP2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	5
osa04136	Autophagy - other	2
osa04145	Phagosome	2
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2
osa00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5
ath04016	MAPK signaling pathway - plant	3
ath00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00440	Phosphonate and phosphinate metabolism	2
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00906	Carotenoid biosynthesis	2
sly00053	Ascorbate and aldarate metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00600	Sphingolipid metabolism	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	6
ghi03272	Virion - Hepatitis viruses	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	3
nta03083	Polycomb repressive complex	3
nta04120	Ubiquitin mediated proteolysis	3
nta04141	Protein processing in endoplasmic reticulum	3

Expression

Expression pattern

Entrez Gene ID^*

4337424

9269562

4348743

123043842

123047442

123062807

123445017

123433081

123424871

100824973

100827242

100823656

100282914

100192826

110433320

8067091

8072264

823869

831747

839060

100499999

100786183

100789769

101255095

101248144

101255692

103835423

103856664

103855416

100261401

104879530

100244841

7477059

7487314

11410065

11424918

25501697

107898645

107930126

107946258

106399491

106371357

106425360

102584135

102593857

102598484

102608182

102609216

102608643

107773966

107779621

107785252

The preparation time of this page was 0.2 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	7	3	3	3	2	3	3	3	3	3	3	2	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4337424 (osa-e.1 coexpression data)

Top 50 enrichment test to 4337424 (osa-e.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**