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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-e.1   4339436   pentatricopeptide repeat-containing protein At3g16610 
 osa-u.5   4339436   pentatricopeptide repeat-containing protein At3g16610 
 osa-r.6   4339436   pentatricopeptide repeat-containing protein At3g16610 
 tae-r.2   123044796   pentatricopeptide repeat-containing protein At4g39530 
 tae-r.2   123080434   pentatricopeptide repeat-containing protein At2g39620 
 tae-r.2   123160330   putative pentatricopeptide repeat-containing protein At3g25970 
 hvu-r.1   123448473   putative pentatricopeptide repeat-containing protein At3g25970 
 bdi-r.1   100835097   putative pentatricopeptide repeat-containing protein At3g25970 
 sbi-r.1   8061057   pentatricopeptide repeat-containing protein At4g33170 

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Top 50 coexpressed genes to 4339436 (osa-e.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4339436 (osa-e.1 coexpression data)

CoexMap"4339436"


osaLOC4339436 | Entrez gene ID : 4339436      
Species osa tae hvu bdi sbi cre vvi bra ath ppo mtr nta bna gma zma cit sly ghi sot
Paralog 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015640809.1 [sequence] [blastp]
XP_015640810.1 [sequence] [blastp]
XP_066166761.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 2,  E.R. 2  (predict for XP_015640809.1)
plas 5,  chlo 2,  E.R. 2  (predict for XP_015640810.1)
plas 5,  chlo 2,  E.R. 2  (predict for XP_066166761.1)
Subcellular
localization
TargetP
chlo 3,  mito 3  (predict for XP_015640809.1)
chlo 3,  mito 3  (predict for XP_015640810.1)
chlo 3,  mito 3  (predict for XP_066166761.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-e.1
for
4339436
osa-u.5
for
4339436
osa-r.6
for
4339436
tae-r.2
for
123044796
tae-r.2
for
123080434
tae-r.2
for
123160330
hvu-r.1
for
123448473
bdi-r.1
for
100835097
sbi-r.1
for
8061057


Ortholog ID: 18424
Species osa tae tae tae hvu bdi sbi
Symbol LOC4339436 LOC123044796 LOC123080434 LOC123160330 LOC123448473 LOC100835097 LOC8061057
Function* pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At2g39620 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 pentatricopeptide repeat-containing protein At4g33170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00514 Other types of O-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4339436 123044796 123080434 123160330 123448473 100835097 8061057
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