ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-e.1	4340783	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
osa-u.5	4340783	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
osa-r.6	4340783	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
osa-m.8	4340783	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
tae-r.2	123167126	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
tae-r.2	123159970	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
tae-r.2	123150733	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
hvu-r.1	123408237	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
bdi-r.1	100827632	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
zma-u.5	100274364	putative protein kinase superfamily protein
sbi-r.1	8076412	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
ath-u.5	SOBIR1	Leucine-rich repeat protein kinase family protein
gma-u.5	100788151	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
gma-u.5	100811980	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
sly-u.5	101259548	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
sly-u.5	101252072	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
bra-r.6	103865168	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
bra-r.6	103865167	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
vvi-u.5	100248492	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
ppo-u.5	7453813	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
ppo-u.5	7458077	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
mtr-u.5	25489526	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
ghi-r.1	121224254	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
ghi-r.1	107946588	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
ghi-r.1	107949720	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
bna-r.1	106446989	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
bna-r.1	106387988	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
bna-r.1	106401121	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
sot-r.1	102583521	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
cit-r.1	127900794	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
cit-r.1	127900795	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
cit-r.1	127901098	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
nta-r.1	107785550	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
nta-r.1	107767265	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1

Top 50 coexpressed genes to 4340783 (osa-e.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4340783 (osa-e.1 coexpression data)

CoexMap"4340783"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(1437 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3446 genes)

IEA

GO MF

GO:0004672 [list] [network] protein kinase activity	(1463 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2335 genes)	IEA

Protein

XP_015640963.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, vacu 2, nucl_plas 2, golg_plas 2, cysk_plas 2, mito_plas 2

(predict for XP_015640963.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_015640963.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-e.1 for 4340783	osa-u.5 for 4340783	osa-r.6 for 4340783	osa-m.8 for 4340783	tae-r.2 for 123167126	tae-r.2 for 123159970	tae-r.2 for 123150733	hvu-r.1 for 123408237	bdi-r.1 for 100827632	zma-u.5 for 100274364	sbi-r.1 for 8076412	ath-u.5 for SOBIR1	gma-u.5 for 100788151	gma-u.5 for 100811980	sly-u.5 for 101259548	sly-u.5 for 101252072	bra-r.6 for 103865168	bra-r.6 for 103865167	vvi-u.5 for 100248492	ppo-u.5 for 7453813	ppo-u.5 for 7458077	mtr-u.5 for 25489526	ghi-r.1 for 121224254	ghi-r.1 for 107946588	ghi-r.1 for 107949720	bna-r.1 for 106446989	bna-r.1 for 106387988	bna-r.1 for 106401121	sot-r.1 for 102583521	cit-r.1 for 127900794	cit-r.1 for 127900795	cit-r.1 for 127901098	nta-r.1 for 107785550	nta-r.1 for 107767265

Ortholog

Ortholog ID: 4526

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

SOBIR1

Function^*

leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1

putative protein kinase superfamily protein

leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1

Leucine-rich repeat protein kinase family protein

leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	2
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	3
zma04626	Plant-pathogen interaction	3
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	4
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2
sly04145	Phagosome	2
sly04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03250	Viral life cycle - HIV-1	2
ghi03272	Virion - Hepatitis viruses	2
ghi04144	Endocytosis	2
ghi00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03250	Viral life cycle - HIV-1	2
ghi03272	Virion - Hepatitis viruses	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	3
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

4340783

123167126

123159970

123150733

123408237

100827632

100274364

8076412

817746

100788151

100811980

101259548

101252072

103865168

103865167

100248492

7453813

7458077

25489526

121224254

107946588

107949720

106387988

106401121

106437712

102583521

102622064

102619215

102621491

107785550

107767265

The preparation time of this page was 0.1 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	1	1	1	1	1	2	2	2	1	2	1	3	3	1	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4340783 (osa-e.1 coexpression data)

Top 50 enrichment test to 4340783 (osa-e.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**