ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-e.1	4347187	mediator of RNA polymerase II transcription subunit 20a
osa-u.5	4347187	mediator of RNA polymerase II transcription subunit 20a
osa-r.6	4347187	mediator of RNA polymerase II transcription subunit 20a
osa-m.8	4347187	mediator of RNA polymerase II transcription subunit 20a
tae-r.2	123111941	mediator of RNA polymerase II transcription subunit 20a
tae-r.2	123103723	mediator of RNA polymerase II transcription subunit 20a
hvu-r.1	123397543	mediator of RNA polymerase II transcription subunit 20a-like
bdi-r.1	100834966	mediator of RNA polymerase II transcription subunit 20a
zma-u.5	100276988	uncharacterized LOC100276988
sbi-r.1	110432278	mediator of RNA polymerase II transcription subunit 20a-like
ath-u.5	AT2G28230	TATA-binding related factor (TRF) of subunit 20 of Mediator complex
gma-u.5	100794645	mediator of RNA polymerase II transcription subunit 20a
gma-u.5	100814806	uncharacterized LOC100814806
sly-u.5	101248747	mediator of RNA polymerase II transcription subunit 20a
bra-r.6	103829718	mediator of RNA polymerase II transcription subunit 20a
vvi-u.5	100247363	mediator of RNA polymerase II transcription subunit 20a
ppo-u.5	18100353	mediator of RNA polymerase II transcription subunit 20a
mtr-u.5	25494183	mediator of RNA polymerase II transcription subunit 20a
mtr-u.5	25486902	mediator of RNA polymerase II transcription subunit 20a
ghi-r.1	107931991	mediator of RNA polymerase II transcription subunit 20a
ghi-r.1	107893356	mediator of RNA polymerase II transcription subunit 20a
bna-r.1	125594762	mediator of RNA polymerase II transcription subunit 20a
bna-r.1	106352570	mediator of RNA polymerase II transcription subunit 20a
bna-r.1	106396345	mediator of RNA polymerase II transcription subunit 20a
sot-r.1	102597436	mediator of RNA polymerase II transcription subunit 20a-like
cit-r.1	102627852	mediator of RNA polymerase II transcription subunit 20a
nta-r.1	107829627	mediator of RNA polymerase II transcription subunit 20a-like
nta-r.1	107791239	mediator of RNA polymerase II transcription subunit 20a-like
nta-r.1	107777337	mediator of RNA polymerase II transcription subunit 20a-like
cre-r.1	CHLRE_11g476900v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(380 genes)

IEA

GO CC

GO:0016592 [list] [network] mediator complex

(36 genes)

IEA

GO MF

GO:0003713 [list] [network] transcription coactivator activity

(28 genes)

IEA

Protein

XP_015651297.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, extr 2, chlo_mito 2

(predict for XP_015651297.1)

Subcellular
localization
TargetP

other 5

(predict for XP_015651297.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-e.1 for 4347187	osa-u.5 for 4347187	osa-r.6 for 4347187	osa-m.8 for 4347187	tae-r.2 for 123111941	tae-r.2 for 123103723	hvu-r.1 for 123397543	bdi-r.1 for 100834966	zma-u.5 for 100276988	sbi-r.1 for 110432278	ath-u.5 for AT2G28230	gma-u.5 for 100794645	gma-u.5 for 100814806	sly-u.5 for 101248747	bra-r.6 for 103829718	vvi-u.5 for 100247363	ppo-u.5 for 18100353	mtr-u.5 for 25494183	mtr-u.5 for 25486902	ghi-r.1 for 107931991	ghi-r.1 for 107893356	bna-r.1 for 125594762	bna-r.1 for 106352570	bna-r.1 for 106396345	sot-r.1 for 102597436	cit-r.1 for 102627852	nta-r.1 for 107829627	nta-r.1 for 107791239	nta-r.1 for 107777337	cre-r.1 for CHLRE_11g476900v5

Ortholog

Ortholog ID: 4198

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*