ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-e.1	4352811	nuclear transcription factor Y subunit A-10
osa-u.5	4352811	nuclear transcription factor Y subunit A-10
osa-r.6	4352811	nuclear transcription factor Y subunit A-10
osa-m.8	4352811	nuclear transcription factor Y subunit A-10
osa-u.5	4333575	nuclear transcription factor Y subunit A-10
osa-u.5	4342440	nuclear transcription factor Y subunit A-5
tae-r.2	123113189	nuclear transcription factor Y subunit A-10
tae-r.2	123102094	nuclear transcription factor Y subunit A-2
tae-r.2	123104898	nuclear transcription factor Y subunit A-10
hvu-r.1	123395532	nuclear transcription factor Y subunit A-10-like
hvu-r.1	123452100	nuclear transcription factor Y subunit A-10-like
bdi-r.1	100833622	nuclear transcription factor Y subunit A-2
bdi-r.1	100827854	nuclear transcription factor Y subunit A-10
zma-u.5	100283565	nuclear transcription factor Y subunit A-10
zma-u.5	100193094	Nuclear transcription factor Y subunit A-10
zma-u.5	100191652	uncharacterized LOC100191652
sbi-r.1	8062205	nuclear transcription factor Y subunit A-10
sbi-r.1	8071483	nuclear transcription factor Y subunit A-10
ath-u.5	NF-YA2	nuclear factor Y, subunit A2
ath-u.5	NF-YA10	nuclear factor Y, subunit A10
gma-u.5	NF-YA10	nuclear transcription factor Y subunit A-10
gma-u.5	NF-YA03	nuclear transcription factor Y subunit A-3
gma-u.5	NF-YA1B	putative CCAAT-binding transcription factor GmNF-YA1b
sly-u.5	101265980	nuclear transcription factor Y subunit A-2-like
sly-u.5	101257995	nuclear transcription factor Y subunit A-10
bra-r.6	103849907	nuclear transcription factor Y subunit A-2
bra-r.6	103846990	nuclear transcription factor Y subunit A-10
bra-r.6	103859112	nuclear transcription factor Y subunit A-2
vvi-u.5	100255650	nuclear transcription factor Y subunit A-10
ppo-u.5	7469937	nuclear transcription factor Y subunit A-10
ppo-u.5	7479478	nuclear transcription factor Y subunit A-10
mtr-u.5	25499499	nuclear transcription factor Y subunit A-10
mtr-u.5	11435082	nuclear transcription factor Y subunit A-10
ghi-r.1	107934555	nuclear transcription factor Y subunit A-10
ghi-r.1	107925528	nuclear transcription factor Y subunit A-10
bna-r.1	125593863	nuclear transcription factor Y subunit A-2-like
bna-r.1	125606372	nuclear transcription factor Y subunit A-2-like
bna-r.1	125606981	nuclear transcription factor Y subunit A-2-like
sot-r.1	102587642	nuclear transcription factor Y subunit A-10-like
sot-r.1	102599915	nuclear transcription factor Y subunit A-10
cit-r.1	102630159	nuclear transcription factor Y subunit A-10
nta-r.1	107826067	nuclear transcription factor Y subunit A-10-like
nta-r.1	107815042	nuclear transcription factor Y subunit A-10
nta-r.1	107808910	nuclear transcription factor Y subunit A-10

Top 50 coexpressed genes to 4352811 (osa-e.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4352811 (osa-e.1 coexpression data)

CoexMap"4352811"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(380 genes)

IEA

GO CC

GO MF

GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific

(257 genes)

IEA

Protein

XP_015618449.1 [sequence] [blastp]
XP_015618450.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, extr 2, pero 1	(predict for XP_015618449.1)
nucl 4, cyto 2, extr 2, pero 1	(predict for XP_015618450.1)

Subcellular
localization
TargetP

scret 2	(predict for XP_015618449.1)
scret 2	(predict for XP_015618450.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-e.1 for 4352811	osa-u.5 for 4352811	osa-r.6 for 4352811	osa-m.8 for 4352811	osa-u.5 for 4333575	osa-u.5 for 4342440	tae-r.2 for 123113189	tae-r.2 for 123102094	tae-r.2 for 123104898	hvu-r.1 for 123395532	hvu-r.1 for 123452100	bdi-r.1 for 100833622	bdi-r.1 for 100827854	zma-u.5 for 100283565	zma-u.5 for 100193094	zma-u.5 for 100191652	sbi-r.1 for 8062205	sbi-r.1 for 8071483	ath-u.5 for NF-YA2	ath-u.5 for NF-YA10	gma-u.5 for NF-YA10	gma-u.5 for NF-YA03	gma-u.5 for NF-YA1B	sly-u.5 for 101265980	sly-u.5 for 101257995	bra-r.6 for 103849907	bra-r.6 for 103846990	bra-r.6 for 103859112	vvi-u.5 for 100255650	ppo-u.5 for 7469937	ppo-u.5 for 7479478	mtr-u.5 for 25499499	mtr-u.5 for 11435082	ghi-r.1 for 107934555	ghi-r.1 for 107925528	bna-r.1 for 125593863	bna-r.1 for 125606372	bna-r.1 for 125606981	sot-r.1 for 102587642	sot-r.1 for 102599915	cit-r.1 for 102630159	nta-r.1 for 107826067	nta-r.1 for 107815042	nta-r.1 for 107808910

Ortholog

Ortholog ID: 2807

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

NF-YA2

NF-YA10

NF-YA03

NF-YA1B

NF-YA01

Function^*

nuclear transcription factor Y subunit A-10

nuclear transcription factor Y subunit A-5

nuclear transcription factor Y subunit A-10

nuclear transcription factor Y subunit A-10-like

nuclear transcription factor Y subunit A-2

nuclear transcription factor Y subunit A-10

Nuclear transcription factor Y subunit A-10

uncharacterized LOC100191652

nuclear transcription factor Y subunit A-10

nuclear factor Y, subunit A2

nuclear factor Y, subunit A10

nuclear transcription factor Y subunit A-3

putative CCAAT-binding transcription factor GmNF-YA1b

nuclear transcription factor Y subunit A-1

nuclear transcription factor Y subunit A-2-like

nuclear transcription factor Y subunit A-10

nuclear transcription factor Y subunit A-2

nuclear transcription factor Y subunit A-10

nuclear transcription factor Y subunit A-2

nuclear transcription factor Y subunit A-10

nuclear transcription factor Y subunit A-2-like

nuclear transcription factor Y subunit A-2

nuclear transcription factor Y subunit A-10-like

nuclear transcription factor Y subunit A-10

nuclear transcription factor Y subunit A-2

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00564	Glycerophospholipid metabolism	2
bdi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00240	Pyrimidine metabolism	2
gma00760	Nicotinate and nicotinamide metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	4
sly04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	6
bra04016	MAPK signaling pathway - plant	4
bra00330	Arginine and proline metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00440	Phosphonate and phosphinate metabolism	4
bna00564	Glycerophospholipid metabolism	4
bna00565	Ether lipid metabolism	4
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	6
sot04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	5
sot04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00999	Biosynthesis of various plant secondary metabolites	4
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00999	Biosynthesis of various plant secondary metabolites	4

Expression

Expression pattern

Entrez Gene ID^*

4352811

4333575

4342440

123104898

123110226

123122712

123395532

123452100

100833622

100827854

100283565

100193094

100191652

8062205

8071483

819738

830539

100527677

100815382

100808195

101265980

101257995

103849907

103846990

103859112

100255650

7469937

7479478

25499499

11435082

107925528

107928144

125593863

125606981

106400279

102587642

102599915

102630159

107815042

107808910

107786257

The preparation time of this page was 0.2 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	3	2	2	3	2	2	3	2	3	1	2	2	2	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4352811 (osa-e.1 coexpression data)

Top 50 enrichment test to 4352811 (osa-e.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**