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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-e.1   9268681   calvin cycle protein CP12-3, chloroplastic 
 osa-u.5   9268681   calvin cycle protein CP12-3, chloroplastic 
 osa-r.6   9268681   calvin cycle protein CP12-3, chloroplastic 
 sbi-r.1   8057901   calvin cycle protein CP12-3, chloroplastic 
 ath-u.5   CP12-3   CP12 domain-containing protein 3 
 sly-u.5   109120159   calvin cycle protein CP12-3, chloroplastic 
 bra-r.6   103832119   calvin cycle protein CP12-3, chloroplastic 
 vvi-u.5   100251226   calvin cycle protein CP12-3, chloroplastic 
 ppo-u.5   7471735   calvin cycle protein CP12-3, chloroplastic 
 ghi-r.1   107896365   calvin cycle protein CP12-3, chloroplastic 
 ghi-r.1   107915278   calvin cycle protein CP12-3, chloroplastic 
 ghi-r.1   107904806   calvin cycle protein CP12-3, chloroplastic 
 bna-r.1   106427310   calvin cycle protein CP12-3, chloroplastic 
 bna-r.1   106421573   calvin cycle protein CP12-3, chloroplastic 
 sot-r.1   102589731   calvin cycle protein CP12-3, chloroplastic 

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Top 50 coexpressed genes to 9268681 (osa-e.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 9268681 (osa-e.1 coexpression data)

CoexMap"9268681"


osaLOC9268681 | Entrez gene ID : 9268681    
Species osa sbi ath sly bra vvi ppo ghi bna sot bdi nta tae zma cre mtr hvu gma cit
Paralog 3 1 1 1 1 1 1 3 2 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080153 [list] [network] negative regulation of reductive pentose-phosphate cycle  (3 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (655 genes)  IEA  
GO MF
Protein XP_015649016.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_015649016.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_015649016.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-e.1
for
9268681
osa-u.5
for
9268681
osa-r.6
for
9268681
sbi-r.1
for
8057901
ath-u.5
for
CP12-3
sly-u.5
for
109120159
bra-r.6
for
103832119
vvi-u.5
for
100251226
ppo-u.5
for
7471735
ghi-r.1
for
107896365
ghi-r.1
for
107915278
ghi-r.1
for
107904806
bna-r.1
for
106427310
bna-r.1
for
106421573
sot-r.1
for
102589731


Ortholog ID: 13487
Species osa sbi ath sly bra vvi ppo ghi ghi ghi bna bna sot
Symbol LOC9268681 LOC8057901 CP12-3 LOC109120159 LOC103832119 LOC100251226 LOC7471735 LOC107915278 LOC107904806 LOC107904800 LOC106427310 LOC106421573 LOC102589731
Function* calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic CP12 domain-containing protein 3 calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 3
ath00380 Tryptophan metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
ath00230 Purine metabolism 2
ath00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 9268681 8057901 843989 109120159 103832119 100251226 7471735 107915278 107904806 107904800 106427310 106421573 102589731
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