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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT2G16365   F-box family protein 
 ath-u.5   AT2G16365   F-box family protein 
 ath-r.7   AT2G16365   F-box family protein 
 ath-m.9   AT2G16365   F-box family protein 
 ath-e.2   AT2G16365   F-box family protein 
 ath-m.4.bio   AT2G16365   F-box family protein 
 ath-m.4.lig   AT2G16365   F-box family protein 
 ath-m.4.str   AT2G16365   F-box family protein 
 ath-m.4.tis   AT2G16365   F-box family protein 
 ath-u.5   AT4G34550   F-box protein 
 bra-r.6   103860448   F-box protein At2g16365 
 bra-r.6   103846044   F-box protein At2g16365 
 bna-r.1   106410776   F-box protein At2g16365 
 bna-r.1   106406028   F-box protein At2g16365 
 ghi-r.1   107928803   uncharacterized LOC107928803 
 ghi-r.1   107945030   uncharacterized LOC107945030 
 cit-r.1   102628277   uncharacterized LOC102628277 
 gma-u.5   100784228   uncharacterized LOC100784228 
 gma-u.5   100795495   F-box protein At2g16365 
 vvi-u.5   100243604   uncharacterized LOC100243604 
 ppo-u.5   7456366   uncharacterized LOC7456366 
 ppo-u.5   7461229   uncharacterized LOC7461229 
 mtr-u.5   11417143   uncharacterized LOC11417143 
 sly-u.5   101263256   F-box protein At2g16365 
 sly-u.5   101251228   uncharacterized LOC101251228 
 sot-r.1   102591212   uncharacterized LOC102591212 
 sot-r.1   102584744   F-box protein At2g16365-like 
 nta-r.1   107768020   protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 
 nta-r.1   107785806   protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 
 nta-r.1   107808647   protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 

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Top 50 coexpressed genes to AT2G16365 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G16365 (ath-m.4.hor coexpression data)

CoexMap"816133"


athAT2G16365 | Entrez gene ID : 816133      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta cre hvu tae bdi osa zma sbi
Paralog 10 2 2 2 1 2 1 2 1 2 2 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010099 [list] [network] regulation of photomorphogenesis  (41 genes)  IGI  
GO:0007623 [list] [network] circadian rhythm  (124 genes)  IEP  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001118328.1 [sequence] [blastp]
NP_001118329.1 [sequence] [blastp]
NP_001323527.1 [sequence] [blastp]
NP_001323528.1 [sequence] [blastp]
NP_671856.2 [sequence] [blastp]
NP_973716.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  vacu 1,  cysk 1  (predict for NP_001118328.1)
nucl 8,  cyto 1,  vacu 1,  cysk 1  (predict for NP_001118329.1)
nucl 9,  cyto 1,  cysk 1  (predict for NP_001323527.1)
nucl 9,  cyto 1,  cysk 1  (predict for NP_001323528.1)
nucl 7,  chlo 1,  cyto 1,  vacu 1,  cysk 1  (predict for NP_671856.2)
nucl 9,  cyto 1,  cysk 1  (predict for NP_973716.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001118328.1)
other 8  (predict for NP_001118329.1)
other 8  (predict for NP_001323527.1)
other 8  (predict for NP_001323528.1)
other 8  (predict for NP_671856.2)
other 8  (predict for NP_973716.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT2G16365
ath-u.5
for
AT2G16365
ath-r.7
for
AT2G16365
ath-m.9
for
AT2G16365
ath-e.2
for
AT2G16365
ath-m.4.bio
for
AT2G16365
ath-m.4.lig
for
AT2G16365
ath-m.4.str
for
AT2G16365
ath-m.4.tis
for
AT2G16365
ath-u.5
for
AT4G34550
bra-r.6
for
103860448
bra-r.6
for
103846044
bna-r.1
for
106410776
bna-r.1
for
106406028
ghi-r.1
for
107928803
ghi-r.1
for
107945030
cit-r.1
for
102628277
gma-u.5
for
100784228
gma-u.5
for
100795495
vvi-u.5
for
100243604
ppo-u.5
for
7456366
ppo-u.5
for
7461229
mtr-u.5
for
11417143
sly-u.5
for
101263256
sly-u.5
for
101251228
sot-r.1
for
102591212
sot-r.1
for
102584744
nta-r.1
for
107768020
nta-r.1
for
107785806
nta-r.1
for
107808647


Ortholog ID: 8873
Species ath ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta
Symbol AT2G16365 AT4G34550 LOC103860448 LOC103846044 LOC106410776 LOC106406028 LOC106433684 LOC107928803 LOC107945030 LOC102628277 LOC100784228 LOC100795495 LOC100243604 LOC7456366 LOC7461229 LOC11417143 LOC101263256 LOC101251228 LOC102591212 LOC102584744 LOC107785806 LOC107808647 LOC107762693
Function* F-box family protein F-box protein F-box protein At2g16365 F-box protein At2g16365 F-box protein At2g16365 F-box protein At2g16365 F-box protein At2g16365 uncharacterized LOC107928803 uncharacterized LOC107945030 uncharacterized LOC102628277 uncharacterized LOC100784228 F-box protein At2g16365 uncharacterized LOC100243604 uncharacterized LOC7456366 uncharacterized LOC7461229 uncharacterized LOC11417143 F-box protein At2g16365 uncharacterized LOC101251228 uncharacterized LOC102591212 F-box protein At2g16365-like protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
sly04075 Plant hormone signal transduction 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816133 829606 103860448 103846044 106410776 106406028 106433684 107928803 107945030 102628277 100784228 100795495 100243604 7456366 7461229 11417143 101263256 101251228 102591212 102584744 107785806 107808647 107762693
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