ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.hor	LAX2	uncharacterized protein
ath-u.5	LAX2	uncharacterized protein
ath-r.7	LAX2	uncharacterized protein
ath-m.9	LAX2	uncharacterized protein
ath-e.2	LAX2	uncharacterized protein
ath-m.4.bio	LAX2	uncharacterized protein
ath-m.4.lig	LAX2	uncharacterized protein
ath-m.4.str	LAX2	uncharacterized protein
ath-m.4.tis	LAX2	uncharacterized protein
ath-u.5	AUX1	Transmembrane amino acid transporter family protein
ath-u.5	LAX1	uncharacterized protein
ath-u.5	LAX3	uncharacterized protein
bra-r.6	103853090	auxin transporter-like protein 3
bra-r.6	103857759	auxin transporter protein 1
bra-r.6	103847503	auxin transporter-like protein 1
bna-r.1	125604156	auxin transporter-like protein 3
bna-r.1	106435878	auxin transporter-like protein 1
bna-r.1	106429411	auxin transporter-like protein 2
ghi-r.1	107890973	auxin transporter-like protein 2
ghi-r.1	107891563	auxin transporter-like protein 2
ghi-r.1	107899523	auxin transporter-like protein 2
cit-r.1	102616273	auxin transporter-like protein 3
cit-r.1	102613492	auxin transporter-like protein 2
cit-r.1	102611910	auxin transporter-like protein 5
gma-u.5	LAX7	auxin transporter-like protein 7
gma-u.5	LAX15	auxin transporter-like protein 15
gma-u.5	LAX9	auxin transporter-like protein 9
vvi-u.5	100267240	auxin transporter-like protein 2
vvi-u.5	100233126	auxin transporter-like protein 2
vvi-u.5	100243769	auxin transporter-like protein 3
ppo-u.5	7460939	auxin transporter-like protein 3
ppo-u.5	7466059	auxin transporter-like protein 2
ppo-u.5	7470387	auxin transporter-like protein 5
mtr-u.5	25494399	auxin transporter-like protein 4
mtr-u.5	25492791	auxin transporter-like protein 5
mtr-u.5	11407085	auxin transporter-like protein 2
sly-u.5	LAX5	auxin transporter-like protein 5
sly-u.5	LAX1	auxin transporter-like protein 1
sly-u.5	LAX3	auxin transporter-like protein 3
sot-r.1	102587153	auxin transporter-like protein 2
sot-r.1	102584729	auxin transporter-like protein 3
sot-r.1	102586608	auxin transporter-like protein 4
nta-r.1	107818122	auxin transporter-like protein 2
nta-r.1	107816434	auxin transporter-like protein 2
nta-r.1	107810165	auxin transporter-like protein 2
osa-u.5	4349885	putative auxin transporter-like protein 4
osa-u.5	4348107	auxin transporter-like protein 3
osa-u.5	4338948	auxin transporter-like protein 2
zma-u.5	103654551	auxin transporter-like protein 3
zma-u.5	100285200	uncharacterized LOC100285200
zma-u.5	100284071	uncharacterized LOC100284071
tae-r.2	123062642	auxin transporter-like protein 1
tae-r.2	123058218	auxin transporter-like protein 2
tae-r.2	123085185	auxin transporter-like protein 2
hvu-r.1	123449170	auxin transporter-like protein 2
hvu-r.1	123446182	putative auxin transporter-like protein 4
hvu-r.1	123445956	auxin transporter-like protein 2
sbi-r.1	8072513	auxin transporter-like protein 2
sbi-r.1	8070688	auxin transporter-like protein 3
sbi-r.1	8054354	auxin transporter-like protein 2
bdi-r.1	100840134	auxin transporter-like protein 3
bdi-r.1	100835087	auxin transporter-like protein 1
bdi-r.1	100821781	auxin transporter-like protein 3

Top 50 coexpressed genes to LAX2 (ath-m.4.hor coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to LAX2 (ath-m.4.hor coexpression data)

CoexMap"816640"

[Cytoscape]

Annotation

functional annotation

KEGG

ath04075 [list] [network] Plant hormone signal transduction (433 genes)

GO BP

GO:0048829 [list] [network] root cap development	(15 genes)	IGI
GO:0010588 [list] [network] cotyledon vascular tissue pattern formation	(19 genes)	IMP
GO:0010262 [list] [network] somatic embryogenesis	(27 genes)	IMP
GO:0009624 [list] [network] response to nematode	(90 genes)	HEP

GO CC

GO:0005886 [list] [network] plasma membrane

(2598 genes)

ISM

GO MF

GO:0015171 [list] [network] amino acid transmembrane transporter activity

(78 genes)

ISS

Protein

NP_179701.1 [sequence] [blastp]

Subcellular
localization
wolf

cysk 8, cyto 1

(predict for NP_179701.1)

Subcellular
localization
TargetP

other 9

(predict for NP_179701.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.hor for LAX2	ath-u.5 for LAX2	ath-r.7 for LAX2	ath-m.9 for LAX2	ath-e.2 for LAX2	ath-m.4.bio for LAX2	ath-m.4.lig for LAX2	ath-m.4.str for LAX2	ath-m.4.tis for LAX2	ath-u.5 for AUX1	ath-u.5 for LAX1	ath-u.5 for LAX3	bra-r.6 for 103853090	bra-r.6 for 103857759	bra-r.6 for 103847503	bna-r.1 for 125604156	bna-r.1 for 106435878	bna-r.1 for 106429411	ghi-r.1 for 107890973	ghi-r.1 for 107891563	ghi-r.1 for 107899523	cit-r.1 for 102616273	cit-r.1 for 102613492	cit-r.1 for 102611910	gma-u.5 for LAX7	gma-u.5 for LAX15	gma-u.5 for LAX9	vvi-u.5 for 100267240	vvi-u.5 for 100233126	vvi-u.5 for 100243769	ppo-u.5 for 7460939	ppo-u.5 for 7466059	ppo-u.5 for 7470387	mtr-u.5 for 25494399	mtr-u.5 for 25492791	mtr-u.5 for 11407085	sly-u.5 for LAX5	sly-u.5 for LAX1	sly-u.5 for LAX3	sot-r.1 for 102587153	sot-r.1 for 102584729	sot-r.1 for 102586608	nta-r.1 for 107818122	nta-r.1 for 107816434	nta-r.1 for 107810165	osa-u.5 for 4349885	osa-u.5 for 4348107	osa-u.5 for 4338948	zma-u.5 for 103654551	zma-u.5 for 100285200	zma-u.5 for 100284071	tae-r.2 for 123062642	tae-r.2 for 123058218	tae-r.2 for 123085185	hvu-r.1 for 123449170	hvu-r.1 for 123446182	hvu-r.1 for 123445956	sbi-r.1 for 8072513	sbi-r.1 for 8070688	sbi-r.1 for 8054354	bdi-r.1 for 100840134	bdi-r.1 for 100835087	bdi-r.1 for 100821781

Ortholog

Ortholog ID: 424

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LAX2

LAX1

LAX3

AUX1

LAX15

LAX1

LAX2

LAX5

LAX1

LAX2

Function^*

uncharacterized protein