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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   NAI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   NAI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-r.7   NAI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.9   NAI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-e.2   NAI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.bio   NAI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.lig   NAI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.str   NAI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.tis   NAI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103842463   transcription factor NAI1 
 bra-r.6   103864386   transcription factor NAI1 
 bna-r.1   106371333   transcription factor NAI1 
 bna-r.1   106394570   transcription factor NAI1 
 bna-r.1   106412047   transcription factor NAI1-like 

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Top 50 coexpressed genes to NAI1 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NAI1 (ath-m.4.hor coexpression data)

CoexMap"816807"


athNAI1 | Entrez gene ID : 816807      
Species ath bra bna vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr
Paralog 9 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007029 [list] [network] endoplasmic reticulum organization  (17 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IMP TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_850031.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for NP_850031.2)
Subcellular
localization
TargetP
other 8  (predict for NP_850031.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
NAI1
ath-u.5
for
NAI1
ath-r.7
for
NAI1
ath-m.9
for
NAI1
ath-e.2
for
NAI1
ath-m.4.bio
for
NAI1
ath-m.4.lig
for
NAI1
ath-m.4.str
for
NAI1
ath-m.4.tis
for
NAI1
bra-r.6
for
103842463
bra-r.6
for
103864386
bna-r.1
for
106371333
bna-r.1
for
106394570
bna-r.1
for
106412047


Ortholog ID: 18088
Species ath bra bra bna bna bna
Symbol NAI1 LOC103842463 LOC103864386 LOC106371333 LOC106412047 LOC106449804
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor NAI1 transcription factor NAI1 transcription factor NAI1 transcription factor NAI1-like transcription factor NAI1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 2
ath00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 4
bra01200 Carbon metabolism 4
bra04016 MAPK signaling pathway - plant 3
bra00380 Tryptophan metabolism 2
bra04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816807 103842463 103864386 106371333 106412047 106449804
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