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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   PEX12   peroxin-12 
 ath-u.5   PEX12   peroxin-12 
 ath-r.7   PEX12   peroxin-12 
 ath-m.9   PEX12   peroxin-12 
 ath-e.2   PEX12   peroxin-12 
 ath-m.4.bio   PEX12   peroxin-12 
 ath-m.4.lig   PEX12   peroxin-12 
 ath-m.4.str   PEX12   peroxin-12 
 ath-m.4.tis   PEX12   peroxin-12 
 bra-r.6   103859036   peroxisome biogenesis protein 12 
 bra-r.6   103848917   peroxisome biogenesis protein 12 
 bna-r.1   106447632   peroxisome biogenesis protein 12 
 bna-r.1   106438982   peroxisome biogenesis protein 12 
 ghi-r.1   107892668   peroxisome biogenesis protein 12 
 ghi-r.1   107928763   peroxisome biogenesis protein 12 
 cit-r.1   102623127   peroxisome biogenesis protein 12 
 gma-u.5   100814145   peroxisome biogenesis protein 12 
 gma-u.5   100804330   peroxisome biogenesis protein 12 
 vvi-u.5   100257920   peroxisome biogenesis protein 12 
 ppo-u.5   7465944   peroxisome biogenesis protein 12 
 mtr-u.5   11421943   peroxisome biogenesis protein 12 
 sly-u.5   101252586   peroxisome biogenesis protein 12 
 sot-r.1   102592664   peroxisome biogenesis protein 12 
 nta-r.1   107779004   peroxisome biogenesis protein 12-like 
 nta-r.1   107790191   peroxisome biogenesis protein 12 
 osa-u.5   4348849   peroxisome biogenesis protein 12 
 tae-r.2   123180991   peroxisome biogenesis protein 12 
 tae-r.2   123120682   peroxisome biogenesis protein 12 
 tae-r.2   123045054   peroxisome biogenesis protein 12 
 hvu-r.1   123430537   peroxisome biogenesis protein 12 
 sbi-r.1   8076612   peroxisome biogenesis protein 12 
 bdi-r.1   100830228   peroxisome biogenesis protein 12 
 cre-r.1   CHLRE_06g263602v5   uncharacterized protein 

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Top 50 coexpressed genes to PEX12 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PEX12 (ath-m.4.hor coexpression data)

CoexMap"819602"


athPEX12 | Entrez gene ID : 819602      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa tae hvu sbi bdi cre zma
Paralog 9 2 2 2 1 2 1 1 1 1 1 2 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04146 [list] [network] Peroxisome (90 genes)
GO BP
GO:0006513 [list] [network] protein monoubiquitination  (4 genes)  IDA  
GO:0016558 [list] [network] protein import into peroxisome matrix  (9 genes)  IDA IMP  
GO:0006635 [list] [network] fatty acid beta-oxidation  (24 genes)  IMP  
GO:0007031 [list] [network] peroxisome organization  (31 genes)  IMP  
GO:0048598 [list] [network] embryonic morphogenesis  (43 genes)  IMP  
GO CC
GO:0005778 [list] [network] peroxisomal membrane  (16 genes)  IDA  
GO:0005777 [list] [network] peroxisome  (313 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  IDA  
Protein NP_001325637.1 [sequence] [blastp]
NP_187096.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  nucl_plas 4,  cyto 2,  chlo 1,  mito 1,  plas 1,  pero 1,  chlo_mito 1  (predict for NP_001325637.1)
cyto 4,  nucl 2,  nucl_plas 2,  cyto_E.R. 2  (predict for NP_187096.2)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001325637.1)
other 5,  mito 4  (predict for NP_187096.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
PEX12
ath-u.5
for
PEX12
ath-r.7
for
PEX12
ath-m.9
for
PEX12
ath-e.2
for
PEX12
ath-m.4.bio
for
PEX12
ath-m.4.lig
for
PEX12
ath-m.4.str
for
PEX12
ath-m.4.tis
for
PEX12
bra-r.6
for
103859036
bra-r.6
for
103848917
bna-r.1
for
106447632
bna-r.1
for
106438982
ghi-r.1
for
107892668
ghi-r.1
for
107928763
cit-r.1
for
102623127
gma-u.5
for
100814145
gma-u.5
for
100804330
vvi-u.5
for
100257920
ppo-u.5
for
7465944
mtr-u.5
for
11421943
sly-u.5
for
101252586
sot-r.1
for
102592664
nta-r.1
for
107779004
nta-r.1
for
107790191
osa-u.5
for
4348849
tae-r.2
for
123180991
tae-r.2
for
123120682
tae-r.2
for
123045054
hvu-r.1
for
123430537
sbi-r.1
for
8076612
bdi-r.1
for
100830228
cre-r.1
for
CHLRE_06g263602v5


Ortholog ID: 10060
Species ath bra bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa tae tae tae hvu sbi bdi cre
Symbol PEX12 LOC103859036 LOC103848917 LOC106447632 LOC106438982 LOC107892668 LOC107928763 LOC102623127 LOC100814145 LOC100804330 LOC100257920 LOC7465944 LOC11421943 LOC101252586 LOC102592664 LOC107779004 LOC107790191 LOC4348849 LOC123180991 LOC123120682 LOC123045054 LOC123430537 LOC8076612 LOC100830228 CHLRE_06g263602v5
Function* peroxin-12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12-like peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 peroxisome biogenesis protein 12 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath03050 Proteasome 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi04146 Peroxisome 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
ppo00740 Riboflavin metabolism 2
ppo00280 Valine, leucine and isoleucine degradation 2
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta03040 Spliceosome 2
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819602 103859036 103848917 106447632 106438982 107892668 107928763 102623127 100814145 100804330 100257920 7465944 11421943 101252586 102592664 107779004 107790191 4348849 123180991 123120682 123045054 123430537 8076612 100830228 5721990
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