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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT3G48810   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT3G48810   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT3G48810   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT3G48810   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT3G48810   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT3G48810   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT3G48810   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT3G48810   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT3G48810   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103874872   pentatricopeptide repeat-containing protein At3g48810 
 bna-r.1   106447540   pentatricopeptide repeat-containing protein At3g48810 
 bna-r.1   106376583   pentatricopeptide repeat-containing protein At3g48810-like 
 ghi-r.1   107936085   pentatricopeptide repeat-containing protein At3g48810 
 ghi-r.1   121203674   pentatricopeptide repeat-containing protein At3g48810 
 cit-r.1   102608079   pentatricopeptide repeat-containing protein At3g48810 
 gma-u.5   100783217   pentatricopeptide repeat-containing protein At3g48810 
 ppo-u.5   7468113   pentatricopeptide repeat-containing protein At3g48810 
 mtr-u.5   11419828   pentatricopeptide repeat-containing protein At3g48810 
 sly-u.5   101259072   pentatricopeptide repeat-containing protein At3g48810 
 sot-r.1   102594699   pentatricopeptide repeat-containing protein At3g48810 
 nta-r.1   107780333   uncharacterized LOC107780333 
 nta-r.1   107808993   uncharacterized LOC107808993 
 zma-u.5   100274417   uncharacterized LOC100274417 
 hvu-r.1   123417671   pentatricopeptide repeat-containing protein At3g48810-like 

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Top 50 coexpressed genes to AT3G48810 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G48810 (ath-m.4.hor coexpression data)

CoexMap"824042"


athAT3G48810 | Entrez gene ID : 824042      
Species ath bra bna ghi cit gma ppo mtr sly sot nta zma hvu cre vvi tae bdi osa sbi
Paralog 9 1 2 2 1 1 1 1 1 1 2 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000963 [list] [network] mitochondrial RNA processing  (26 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (195 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA ISM  
GO MF
Protein NP_190450.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  E.R. 2,  nucl 1,  E.R._vacu 1  (predict for NP_190450.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_190450.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT3G48810
ath-u.5
for
AT3G48810
ath-r.7
for
AT3G48810
ath-m.9
for
AT3G48810
ath-e.2
for
AT3G48810
ath-m.4.bio
for
AT3G48810
ath-m.4.lig
for
AT3G48810
ath-m.4.str
for
AT3G48810
ath-m.4.tis
for
AT3G48810
bra-r.6
for
103874872
bna-r.1
for
106447540
bna-r.1
for
106376583
ghi-r.1
for
107936085
ghi-r.1
for
121203674
cit-r.1
for
102608079
gma-u.5
for
100783217
ppo-u.5
for
7468113
mtr-u.5
for
11419828
sly-u.5
for
101259072
sot-r.1
for
102594699
nta-r.1
for
107780333
nta-r.1
for
107808993
zma-u.5
for
100274417
hvu-r.1
for
123417671


Ortholog ID: 11335
Species ath bra bna bna ghi ghi cit gma ppo mtr sly sot nta nta zma hvu
Symbol AT3G48810 LOC103874872 LOC106447540 LOC106376583 LOC107936085 LOC121203674 LOC102608079 LOC100783217 LOC7468113 LOC11419828 LOC101259072 LOC102594699 LOC107780333 LOC107808993 LOC100274417 LOC123417671
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g48810 pentatricopeptide repeat-containing protein At3g48810 pentatricopeptide repeat-containing protein At3g48810-like pentatricopeptide repeat-containing protein At3g48810 pentatricopeptide repeat-containing protein At3g48810 pentatricopeptide repeat-containing protein At3g48810 pentatricopeptide repeat-containing protein At3g48810 pentatricopeptide repeat-containing protein At3g48810 pentatricopeptide repeat-containing protein At3g48810 pentatricopeptide repeat-containing protein At3g48810 pentatricopeptide repeat-containing protein At3g48810 uncharacterized LOC107780333 uncharacterized LOC107808993 uncharacterized LOC100274417 pentatricopeptide repeat-containing protein At3g48810-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824042 103874872 106447540 106376583 107936085 121203674 102608079 100783217 7468113 11419828 101259072 102594699 107780333 107808993 100274417 123417671
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