Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   G4   UbiA prenyltransferase family protein 
 ath-u.5   G4   UbiA prenyltransferase family protein 
 ath-r.7   G4   UbiA prenyltransferase family protein 
 ath-m.9   G4   UbiA prenyltransferase family protein 
 ath-e.2   G4   UbiA prenyltransferase family protein 
 ath-m.4.bio   G4   UbiA prenyltransferase family protein 
 ath-m.4.lig   G4   UbiA prenyltransferase family protein 
 ath-m.4.str   G4   UbiA prenyltransferase family protein 
 ath-m.4.tis   G4   UbiA prenyltransferase family protein 
 bra-r.6   103848641   chlorophyll synthase, chloroplastic 
 bra-r.6   103841124   chlorophyll synthase, chloroplastic 
 bna-r.1   106367679   chlorophyll synthase, chloroplastic-like 
 bna-r.1   106402842   chlorophyll synthase, chloroplastic 
 bna-r.1   106349059   chlorophyll synthase, chloroplastic 
 ghi-r.1   107899551   chlorophyll synthase, chloroplastic-like 
 ghi-r.1   107931248   chlorophyll synthase, chloroplastic 
 cit-r.1   102615732   chlorophyll synthase, chloroplastic 
 gma-u.5   100800348   chlorophyll synthase, chloroplastic 
 gma-u.5   100787459   chlorophyll synthase, chloroplastic-like 
 gma-u.5   100779167   chlorophyll synthase, chloroplastic 
 vvi-u.5   100250669   chlorophyll synthase, chloroplastic 
 ppo-u.5   7487329   chlorophyll synthase, chloroplastic 
 ppo-u.5   7466089   chlorophyll synthase, chloroplastic 
 mtr-u.5   25498789   chlorophyll synthase, chloroplastic 
 sly-u.5   101246752   chlorophyll synthase, chloroplastic 
 sot-r.1   102580726   chlorophyll synthase, chloroplastic 
 nta-r.1   107781977   chlorophyll synthase, chloroplastic-like 
 nta-r.1   107794961   chlorophyll synthase, chloroplastic 
 osa-u.5   4338498   chlorophyll synthase, chloroplastic-like 
 zma-u.5   100274372   Chlorophyll synthase chloroplastic 
 tae-r.2   123129081   chlorophyll synthase, chloroplastic 
 tae-r.2   123052740   chlorophyll synthase, chloroplastic 
 tae-r.2   123181728   chlorophyll synthase, chloroplastic 
 hvu-r.1   123441047   chlorophyll synthase, chloroplastic 
 sbi-r.1   8061338   chlorophyll synthase, chloroplastic 
 bdi-r.1   100841031   chlorophyll synthase, chloroplastic 
 cre-r.1   CHLRE_06g294750v5   uncharacterized protein 

close


Top 50 coexpressed genes to G4 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to G4 (ath-m.4.hor coexpression data)

CoexMap"824345"


athG4 | Entrez gene ID : 824345    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 3 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00860 [list] [network] Porphyrin metabolism (57 genes)
GO BP
GO:0015995 [list] [network] chlorophyll biosynthetic process  (27 genes)  TAS  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  TAS  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0046408 [list] [network] chlorophyll synthetase activity  (1 genes)  IDA IEA  
Protein NP_190750.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2  (predict for NP_190750.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_190750.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
G4
ath-u.5
for
G4
ath-r.7
for
G4
ath-m.9
for
G4
ath-e.2
for
G4
ath-m.4.bio
for
G4
ath-m.4.lig
for
G4
ath-m.4.str
for
G4
ath-m.4.tis
for
G4
bra-r.6
for
103848641
bra-r.6
for
103841124
bna-r.1
for
106367679
bna-r.1
for
106402842
bna-r.1
for
106349059
ghi-r.1
for
107899551
ghi-r.1
for
107931248
cit-r.1
for
102615732
gma-u.5
for
100800348
gma-u.5
for
100787459
gma-u.5
for
100779167
vvi-u.5
for
100250669
ppo-u.5
for
7487329
ppo-u.5
for
7466089
mtr-u.5
for
25498789
sly-u.5
for
101246752
sot-r.1
for
102580726
nta-r.1
for
107781977
nta-r.1
for
107794961
osa-u.5
for
4338498
zma-u.5
for
100274372
tae-r.2
for
123129081
tae-r.2
for
123052740
tae-r.2
for
123181728
hvu-r.1
for
123441047
sbi-r.1
for
8061338
bdi-r.1
for
100841031
cre-r.1
for
CHLRE_06g294750v5


Ortholog ID: 7614
Species ath bra bra bna bna bna ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol G4 LOC103848641 LOC103841124 LOC106402842 LOC106349059 LOC106437912 LOC107899551 LOC107931248 LOC102615732 LOC100800348 LOC100787459 LOC100779167 LOC100250669 LOC7487329 LOC7466089 LOC25498789 LOC101246752 LOC102580726 LOC107781977 LOC107794961 LOC4338498 LOC100274372 LOC123129081 LOC123052740 LOC123181728 LOC123441047 LOC8061338 LOC100841031 CHLRE_06g294750v5
Function* UbiA prenyltransferase family protein chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic-like chlorophyll synthase, chloroplastic-like chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic-like chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic-like chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic-like Chlorophyll synthase chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic chlorophyll synthase, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00860 Porphyrin metabolism 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
bna00010 Glycolysis / Gluconeogenesis 4
bna00030 Pentose phosphate pathway 4
bna00051 Fructose and mannose metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi00860 Porphyrin metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi00860 Porphyrin metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma00051 Fructose and mannose metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi00270 Cysteine and methionine metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 5
sot03010 Ribosome 3
sot00230 Purine metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00480 Glutathione metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00480 Glutathione metabolism 2
nta00860 Porphyrin metabolism 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma00860 Porphyrin metabolism 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 3
sbi00860 Porphyrin metabolism 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 11
cre01240 Biosynthesis of cofactors 5
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824345 103848641 103841124 106402842 106349059 106437912 107899551 107931248 102615732 100800348 100787459 100779167 100250669 7487329 7466089 25498789 101246752 102580726 107781977 107794961 4338498 100274372 123129081 123052740 123181728 123441047 8061338 100841031 5727131
The preparation time of this page was 0.1 [sec].