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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT3G60540   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-u.5   AT3G60540   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-r.7   AT3G60540   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-m.9   AT3G60540   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-e.2   AT3G60540   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-m.4.bio   AT3G60540   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-m.4.lig   AT3G60540   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-m.4.str   AT3G60540   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-m.4.tis   AT3G60540   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-u.5   SEC61 BETA   Preprotein translocase Sec, Sec61-beta subunit protein 
 ath-u.5   AT5G60460   Preprotein translocase Sec, Sec61-beta subunit protein 
 bra-r.6   103856559   protein transport protein Sec61 subunit beta 
 bra-r.6   103845464   protein transport protein Sec61 subunit beta 
 bra-r.6   103866860   protein transport protein Sec61 subunit beta 
 bna-r.1   106363947   protein transport protein Sec61 subunit beta-like 
 bna-r.1   125579215   protein transport protein Sec61 subunit beta-like 
 bna-r.1   125584164   protein transport protein Sec61 subunit beta-like 
 ghi-r.1   121220129   protein transport protein Sec61 subunit beta 
 ghi-r.1   121225335   protein transport protein Sec61 subunit beta 
 ghi-r.1   107955513   protein transport protein Sec61 subunit beta 
 cit-r.1   102612513   protein transport protein Sec61 subunit beta 
 gma-u.5   100790740   protein transport protein Sec61 subunit beta 
 gma-u.5   100500335   protein transport protein Sec61 subunit beta 
 gma-u.5   100795313   protein transport protein Sec61 subunit beta 
 vvi-u.5   100241050   protein transport protein Sec61 subunit beta 
 vvi-u.5   100260422   protein transport protein Sec61 subunit beta 
 vvi-u.5   100258179   protein transport protein Sec61 subunit beta 
 ppo-u.5   7453947   protein transport protein Sec61 subunit beta 
 ppo-u.5   18101968   protein transport protein Sec61 subunit beta 
 ppo-u.5   18105174   protein transport protein Sec61 subunit beta 
 mtr-u.5   11413802   protein transport protein Sec61 subunit beta 
 mtr-u.5   11422146   protein transport protein Sec61 subunit beta 
 sly-u.5   101268397   protein transport protein Sec61 subunit beta 
 sly-u.5   101245464   protein transport protein Sec61 subunit beta-like 
 sly-u.5   101245632   protein transport protein Sec61 subunit beta 
 sot-r.1   102591878   protein transport protein Sec61 subunit beta-like 
 sot-r.1   102592209   protein transport protein Sec61 subunit beta-like 
 sot-r.1   102597485   protein transport protein Sec61 subunit beta-like 
 osa-u.5   9269540   protein transport protein Sec61 subunit beta 
 osa-u.5   4327929   protein transport protein Sec61 subunit beta 
 osa-u.5   9271333   protein transport protein Sec61 subunit beta 
 zma-u.5   100285315   protein transport protein Sec61 beta subunit 
 zma-u.5   100280873   protein transport protein Sec61 beta subunit 
 zma-u.5   103651507   protein transport protein Sec61 subunit beta 
 tae-r.2   123061342   protein transport protein Sec61 subunit beta 
 tae-r.2   123110125   protein transport protein Sec61 subunit beta 
 tae-r.2   123069928   protein transport protein Sec61 subunit beta 
 hvu-r.1   123448152   protein transport protein Sec61 subunit beta-like 
 hvu-r.1   123443711   protein transport protein Sec61 subunit beta-like 
 hvu-r.1   123397785   protein transport protein Sec61 subunit beta-like 
 sbi-r.1   8078189   protein transport protein Sec61 subunit beta 
 sbi-r.1   8067341   protein transport protein Sec61 subunit beta 
 bdi-r.1   100845129   protein transport protein Sec61 subunit beta 
 bdi-r.1   104584813   protein transport protein Sec61 subunit beta 
 bdi-r.1   100822964   protein transport protein Sec61 subunit beta 
 cre-r.1   CHLRE_07g318450v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G60540 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G60540 (ath-m.4.hor coexpression data)

CoexMap"825225"


athAT3G60540 | Entrez gene ID : 825225      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot osa zma tae hvu sbi bdi cre nta
Paralog 11 3 3 3 1 3 3 3 2 3 3 3 3 3 3 2 3 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03060 [list] [network] Protein export (62 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (220 genes)
ath04145 [list] [network] Phagosome (87 genes)
GO BP
GO:0006886 [list] [network] intracellular protein transport  (149 genes)  IEA  
GO CC
GO MF
Protein NP_001327136.1 [sequence] [blastp]
NP_191613.1 [sequence] [blastp]
NP_974467.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_001327136.1)
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_191613.1)
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_974467.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001327136.1)
mito 5  (predict for NP_191613.1)
mito 5  (predict for NP_974467.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT3G60540
ath-u.5
for
AT3G60540
ath-r.7
for
AT3G60540
ath-m.9
for
AT3G60540
ath-e.2
for
AT3G60540
ath-m.4.bio
for
AT3G60540
ath-m.4.lig
for
AT3G60540
ath-m.4.str
for
AT3G60540
ath-m.4.tis
for
AT3G60540
ath-u.5
for
SEC61 BETA
ath-u.5
for
AT5G60460
bra-r.6
for
103856559
bra-r.6
for
103845464
bra-r.6
for
103866860
bna-r.1
for
106363947
bna-r.1
for
125579215
bna-r.1
for
125584164
ghi-r.1
for
121220129
ghi-r.1
for
121225335
ghi-r.1
for
107955513
cit-r.1
for
102612513
gma-u.5
for
100790740
gma-u.5
for
100500335
gma-u.5
for
100795313
vvi-u.5
for
100241050
vvi-u.5
for
100260422
vvi-u.5
for
100258179
ppo-u.5
for
7453947
ppo-u.5
for
18101968
ppo-u.5
for
18105174
mtr-u.5
for
11413802
mtr-u.5
for
11422146
sly-u.5
for
101268397
sly-u.5
for
101245464
sly-u.5
for
101245632
sot-r.1
for
102591878
sot-r.1
for
102592209
sot-r.1
for
102597485
osa-u.5
for
9269540
osa-u.5
for
4327929
osa-u.5
for
9271333
zma-u.5
for
100285315
zma-u.5
for
100280873
zma-u.5
for
103651507
tae-r.2
for
123061342
tae-r.2
for
123110125
tae-r.2
for
123069928
hvu-r.1
for
123448152
hvu-r.1
for
123443711
hvu-r.1
for
123397785
sbi-r.1
for
8078189
sbi-r.1
for
8067341
bdi-r.1
for
100845129
bdi-r.1
for
104584813
bdi-r.1
for
100822964
cre-r.1
for
CHLRE_07g318450v5


Ortholog ID: 1145
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre
Symbol AT3G60540 SEC61 BETA AT5G60460 LOC103856559 LOC103845464 LOC103866191 LOC125584164 LOC106419724 LOC106454557 LOC121220129 LOC107955513 LOC107949064 LOC102612513 LOC100500335 LOC100814692 LOC100815435 LOC100260422 LOC100258179 LOC100247887 LOC7453947 LOC18101968 LOC18105174 LOC11413802 LOC11419972 LOC101268397 LOC101245464 LOC101268107 LOC102591878 LOC102597485 LOC102598588 LOC9269540 LOC9271333 LOC9266625 LOC100285315 LOC100280873 LOC100286118 LOC123086346 LOC123103234 LOC123111425 LOC123448152 LOC123443711 LOC123397785 LOC8078189 LOC8067341 LOC100845129 LOC104584813 LOC100837991 CHLRE_07g318450v5
Function* Preprotein translocase Sec, Sec61-beta subunit protein Preprotein translocase Sec, Sec61-beta subunit protein Preprotein translocase Sec, Sec61-beta subunit protein protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 beta subunit protein transport protein Sec61 beta subunit protein transport protein Sec61 beta subunit protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta-like protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta protein transport protein Sec61 subunit beta uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 15
ath03060 Protein export 6
ath04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 6
ath04145 Phagosome 6
ath03060 Protein export 5
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 6
bra04145 Phagosome 5
bra03060 Protein export 4
bra04148 Efferocytosis 3
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
bna04141 Protein processing in endoplasmic reticulum 4
bna04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
bna04141 Protein processing in endoplasmic reticulum 4
bna04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 6
bna04141 Protein processing in endoplasmic reticulum 6
bna04145 Phagosome 6
bna00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 14
gma03060 Protein export 7
gma04145 Phagosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03060 Protein export 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00190 Oxidative phosphorylation 3
vvi03060 Protein export 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 3
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo00190 Oxidative phosphorylation 5
ppo04145 Phagosome 4
ppo03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 6
ppo04141 Protein processing in endoplasmic reticulum 6
ppo04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr04141 Protein processing in endoplasmic reticulum 6
mtr03060 Protein export 5
mtr04145 Phagosome 4
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 14
mtr04145 Phagosome 6
mtr03060 Protein export 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 11
sly03060 Protein export 4
sly04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly00190 Oxidative phosphorylation 3
sly03060 Protein export 2
sly04145 Phagosome 2
sly03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly04141 Protein processing in endoplasmic reticulum 5
sly03060 Protein export 4
sly04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 11
sot03060 Protein export 6
sot04145 Phagosome 5
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
sot03060 Protein export 2
sot04141 Protein processing in endoplasmic reticulum 2
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03060 Protein export 2
sot04141 Protein processing in endoplasmic reticulum 2
sot04145 Phagosome 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03060 Protein export 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04145 Phagosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
osa00450 Selenocompound metabolism 2
osa03060 Protein export 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 8
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 13
zma03060 Protein export 9
zma04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 4
zma04145 Phagosome 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 4
zma04141 Protein processing in endoplasmic reticulum 4
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 6
tae04141 Protein processing in endoplasmic reticulum 6
tae04145 Phagosome 6
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 6
tae04141 Protein processing in endoplasmic reticulum 6
tae04145 Phagosome 6
tae00051 Fructose and mannose metabolism 5
tae00541 Biosynthesis of various nucleotide sugars 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 6
tae04141 Protein processing in endoplasmic reticulum 6
tae04145 Phagosome 6
tae00220 Arginine biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 7
hvu03060 Protein export 2
hvu04145 Phagosome 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 11
hvu03060 Protein export 7
hvu04145 Phagosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 5
hvu01200 Carbon metabolism 2
hvu03060 Protein export 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04145 Phagosome 4
sbi03060 Protein export 4
sbi04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 5
sbi03060 Protein export 3
sbi04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 10
bdi04145 Phagosome 6
bdi03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 5
cre03060 Protein export 4
cre04145 Phagosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825225 819114 28721282 103856559 103845464 103866191 125584164 106419724 106454557 121220129 107955513 107949064 102612513 100500335 100814692 100815435 100260422 100258179 100247887 7453947 18101968 18105174 11413802 11419972 101268397 101245464 101268107 102591878 102597485 102598588 9269540 9271333 9266625 100285315 100280873 100286118 123086346 123103234 123111425 123448152 123443711 123397785 8078189 8067341 100845129 104584813 100837991 5726375
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