ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-m.4.hor	AT3G62450	DNA mismatch repair protein
ath-u.5	AT3G62450	DNA mismatch repair protein
ath-r.7	AT3G62450	DNA mismatch repair protein
ath-m.9	AT3G62450	DNA mismatch repair protein
ath-e.2	AT3G62450	DNA mismatch repair protein
ath-m.4.bio	AT3G62450	DNA mismatch repair protein
ath-m.4.lig	AT3G62450	DNA mismatch repair protein
ath-m.4.str	AT3G62450	DNA mismatch repair protein
ath-m.4.tis	AT3G62450	DNA mismatch repair protein
bra-r.6	103842060	uncharacterized LOC103842060
bna-r.1	BNAA09G39890D	uncharacterized BNAA09G39890D
bna-r.1	106451989	uncharacterized LOC106451989
ghi-r.1	107932112	uncharacterized LOC107932112
cit-r.1	107178383	uncharacterized LOC107178383
gma-u.5	100810605	uncharacterized LOC100810605
ppo-u.5	18099053	uncharacterized LOC18099053
mtr-u.5	11430517	uncharacterized LOC11430517
sly-u.5	101264058	uncharacterized LOC101264058
osa-u.5	107279755	uncharacterized LOC107279755
osa-u.5	9267534	uncharacterized LOC9267534
zma-u.5	100276710	uncharacterized LOC100276710
zma-u.5	100278222	uncharacterized LOC100278222
tae-r.2	123111401	uncharacterized LOC123111401
sbi-r.1	8055495	uncharacterized LOC8055495
cre-r.1	CHLRE_02g089000v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4244 genes)

ISM

GO MF

Protein

NP_191804.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 9

(predict for NP_191804.1)

Subcellular
localization
TargetP

scret 8, other 3

(predict for NP_191804.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.hor for AT3G62450	ath-u.5 for AT3G62450	ath-r.7 for AT3G62450	ath-m.9 for AT3G62450	ath-e.2 for AT3G62450	ath-m.4.bio for AT3G62450	ath-m.4.lig for AT3G62450	ath-m.4.str for AT3G62450	ath-m.4.tis for AT3G62450	bra-r.6 for 103842060	bna-r.1 for BNAA09G39890D	bna-r.1 for 106451989	ghi-r.1 for 107932112	cit-r.1 for 107178383	gma-u.5 for 100810605	ppo-u.5 for 18099053	mtr-u.5 for 11430517	sly-u.5 for 101264058	osa-u.5 for 107279755	osa-u.5 for 9267534	zma-u.5 for 100276710	zma-u.5 for 100278222	tae-r.2 for 123111401	sbi-r.1 for 8055495	cre-r.1 for CHLRE_02g089000v5

Ortholog

Ortholog ID: 12911

Species

ath

bra

bna

ghi

cit

gma

ppo

mtr

sly

osa

zma

tae

sbi

cre

Symbol

Function^*

DNA mismatch repair protein

uncharacterized LOC103842060

uncharacterized BNAA09G39890D

uncharacterized LOC106451989

uncharacterized LOC107932112

uncharacterized LOC107178383

uncharacterized LOC100810605

uncharacterized LOC18099053

uncharacterized LOC11430517

uncharacterized LOC101264058

uncharacterized LOC107279755

uncharacterized LOC9267534

uncharacterized LOC100276710

uncharacterized LOC100278222

uncharacterized LOC123111401

uncharacterized LOC8055495

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi03060	Protein export	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma03022	Basal transcription factors	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2
ppo04120	Ubiquitin mediated proteolysis	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	12
mtr00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03060	Protein export	5
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	4
sbi03420	Nucleotide excision repair	3
sbi03020	RNA polymerase	2
sbi03040	Spliceosome	2
sbi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

825418

103842060

106368521

106451989

107932112

107178383

100810605

18099053

11430517

101264058

107279755

9267534

100276710

100278222

123111401

8055495

5727446

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT3G62450 (ath-m.4.hor coexpression data)

Top 50 enrichment test to AT3G62450 (ath-m.4.hor coexpression data)


Species	ath	bra	bna	ghi	cit	gma	ppo	mtr	sly	osa	zma	tae	sbi	cre	sot	hvu	vvi	nta	bdi
Paralog	9	1	2	1	1	1	1	1	1	2	2	1	1	1	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G62450 (ath-m.4.hor coexpression data)

Top 50 enrichment test to AT3G62450 (ath-m.4.hor coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**