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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT4G08250   GRAS family transcription factor 
 ath-m.9   AT4G08250   GRAS family transcription factor 
 ath-m.4.bio   AT4G08250   GRAS family transcription factor 
 ath-m.4.lig   AT4G08250   GRAS family transcription factor 
 ath-m.4.str   AT4G08250   GRAS family transcription factor 
 ath-m.4.tis   AT4G08250   GRAS family transcription factor 
 ghi-r.1   107901401   protein NODULATION SIGNALING PATHWAY 2 
 cit-r.1   102620887   protein NODULATION SIGNALING PATHWAY 2 
 gma-u.5   100816317   protein NODULATION SIGNALING PATHWAY 2 
 mtr-u.5   11436588   protein NODULATION SIGNALING PATHWAY 2 
 mtr-u.5   11406790   protein NODULATION SIGNALING PATHWAY 2 
 sly-u.5   101251144   protein NODULATION SIGNALING PATHWAY 2 
 sot-r.1   102585836   nodulation-signaling pathway 2 protein 
 nta-r.1   107782660   protein NODULATION SIGNALING PATHWAY 2-like 
 nta-r.1   107765749   protein NODULATION SIGNALING PATHWAY 2-like 
 osa-u.5   107276070   protein NODULATION SIGNALING PATHWAY 2-like 
 hvu-r.1   123446671   protein NODULATION SIGNALING PATHWAY 2-like 

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Top 50 coexpressed genes to AT4G08250 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G08250 (ath-m.4.hor coexpression data)

CoexMap"826375"


athAT4G08250 | Entrez gene ID : 826375      
Species ath ghi cit gma mtr sly sot nta osa hvu sbi cre ppo bra tae zma bdi vvi bna
Paralog 6 1 1 1 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_192565.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 2  (predict for NP_192565.1)
Subcellular
localization
TargetP
other 7  (predict for NP_192565.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT4G08250
ath-m.9
for
AT4G08250
ath-m.4.bio
for
AT4G08250
ath-m.4.lig
for
AT4G08250
ath-m.4.str
for
AT4G08250
ath-m.4.tis
for
AT4G08250
ghi-r.1
for
107901401
cit-r.1
for
102620887
gma-u.5
for
100816317
mtr-u.5
for
11436588
mtr-u.5
for
11406790
sly-u.5
for
101251144
sot-r.1
for
102585836
nta-r.1
for
107782660
nta-r.1
for
107765749
osa-u.5
for
107276070
hvu-r.1
for
123446671


Ortholog ID: 9003
Species ghi cit gma mtr mtr sly sot nta nta osa hvu
Symbol LOC107901401 LOC102620887 LOC100816317 LOC11436588 LOC11406790 LOC101251144 LOC102585836 LOC107782660 LOC107765749 LOC107276070 LOC123446671
Function* protein NODULATION SIGNALING PATHWAY 2 protein NODULATION SIGNALING PATHWAY 2 protein NODULATION SIGNALING PATHWAY 2 protein NODULATION SIGNALING PATHWAY 2 protein NODULATION SIGNALING PATHWAY 2 protein NODULATION SIGNALING PATHWAY 2 nodulation-signaling pathway 2 protein protein NODULATION SIGNALING PATHWAY 2-like protein NODULATION SIGNALING PATHWAY 2-like protein NODULATION SIGNALING PATHWAY 2-like protein NODULATION SIGNALING PATHWAY 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 7
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00920 Sulfur metabolism 5
sot01320 Sulfur cycle 5
sot00670 One carbon pool by folate 2
sot01230 Biosynthesis of amino acids 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107901401 102620887 100816317 11436588 11406790 101251144 102585836 107782660 107765749 107276070 123446671
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