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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   PUB8   plant U-box 8 
 ath-u.5   PUB8   plant U-box 8 
 ath-r.7   PUB8   plant U-box 8 
 ath-m.9   PUB8   plant U-box 8 
 ath-e.2   PUB8   plant U-box 8 
 ath-m.4.bio   PUB8   plant U-box 8 
 ath-m.4.lig   PUB8   plant U-box 8 
 ath-m.4.str   PUB8   plant U-box 8 
 ath-m.4.tis   PUB8   plant U-box 8 
 bra-r.6   103858963   U-box domain-containing protein 8 
 bna-r.1   106438297   U-box domain-containing protein 8-like 
 ghi-r.1   107960194   U-box domain-containing protein 8 
 ghi-r.1   107940938   U-box domain-containing protein 8 
 ghi-r.1   107925309   U-box domain-containing protein 8 
 cit-r.1   102615274   U-box domain-containing protein 8 
 gma-u.5   100804552   U-box domain-containing protein 8 
 gma-u.5   100813349   U-box domain-containing protein 8 
 vvi-u.5   100852694   U-box domain-containing protein 8 
 ppo-u.5   7494310   U-box domain-containing protein 8 
 mtr-u.5   25493237   U-box domain-containing protein 8 
 sly-u.5   101243851   U-box domain-containing protein 8 
 nta-r.1   107786165   U-box domain-containing protein 8 
 nta-r.1   107761414   U-box domain-containing protein 8 
 osa-u.5   107281829   U-box domain-containing protein 8 
 zma-u.5   103641314   U-box domain-containing protein 8 
 tae-r.2   123168480   U-box domain-containing protein 8 
 tae-r.2   123160771   U-box domain-containing protein 8 
 tae-r.2   123147423   U-box domain-containing protein 8 
 hvu-r.1   123407767   U-box domain-containing protein 8 
 sbi-r.1   8076541   U-box domain-containing protein 8 
 bdi-r.1   100840831   U-box domain-containing protein 8 

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Top 50 coexpressed genes to PUB8 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PUB8 (ath-m.4.hor coexpression data)

CoexMap"827885"


athPUB8 | Entrez gene ID : 827885      
Species ath bra bna ghi cit gma vvi ppo mtr sly nta osa zma tae hvu sbi bdi cre sot
Paralog 9 1 1 3 1 2 1 1 1 1 2 1 1 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (111 genes)  IGI  
GO:0016567 [list] [network] protein ubiquitination  (170 genes)  NAS  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_193866.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  cyto_nucl 3,  nucl 2,  chlo 2,  plas 1,  chlo_mito 1  (predict for NP_193866.1)
Subcellular
localization
TargetP
other 8  (predict for NP_193866.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
PUB8
ath-u.5
for
PUB8
ath-r.7
for
PUB8
ath-m.9
for
PUB8
ath-e.2
for
PUB8
ath-m.4.bio
for
PUB8
ath-m.4.lig
for
PUB8
ath-m.4.str
for
PUB8
ath-m.4.tis
for
PUB8
bra-r.6
for
103858963
bna-r.1
for
106438297
ghi-r.1
for
107960194
ghi-r.1
for
107940938
ghi-r.1
for
107925309
cit-r.1
for
102615274
gma-u.5
for
100804552
gma-u.5
for
100813349
vvi-u.5
for
100852694
ppo-u.5
for
7494310
mtr-u.5
for
25493237
sly-u.5
for
101243851
nta-r.1
for
107786165
nta-r.1
for
107761414
osa-u.5
for
107281829
zma-u.5
for
103641314
tae-r.2
for
123168480
tae-r.2
for
123160771
tae-r.2
for
123147423
hvu-r.1
for
123407767
sbi-r.1
for
8076541
bdi-r.1
for
100840831


Ortholog ID: 8090
Species ath bra bna ghi ghi ghi cit gma gma vvi ppo mtr sly nta nta osa zma tae tae tae hvu sbi bdi
Symbol PUB8 LOC103858963 LOC106438297 LOC107960194 LOC107940938 LOC107925309 LOC102615274 LOC100813349 LOC100796272 LOC100852694 LOC7494310 LOC25493237 LOC101243851 LOC107786165 LOC107761414 LOC107281829 LOC103641314 LOC123168480 LOC123160771 LOC123147423 LOC123407767 LOC8076541 LOC100840831
Function* plant U-box 8 U-box domain-containing protein 8 U-box domain-containing protein 8-like U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8 U-box domain-containing protein 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04626 Plant-pathogen interaction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827885 103858963 106438297 107960194 107940938 107925309 102615274 100813349 100796272 100852694 7494310 25493237 101243851 107786165 107761414 107281829 103641314 123168480 123160771 123147423 123407767 8076541 100840831
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