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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT4G29420   F-box/RNI-like superfamily protein 
 ath-u.5   AT4G29420   F-box/RNI-like superfamily protein 
 ath-r.7   AT4G29420   F-box/RNI-like superfamily protein 
 ath-m.9   AT4G29420   F-box/RNI-like superfamily protein 
 ath-e.2   AT4G29420   F-box/RNI-like superfamily protein 
 ath-m.4.bio   AT4G29420   F-box/RNI-like superfamily protein 
 ath-m.4.lig   AT4G29420   F-box/RNI-like superfamily protein 
 ath-m.4.str   AT4G29420   F-box/RNI-like superfamily protein 
 ath-m.4.tis   AT4G29420   F-box/RNI-like superfamily protein 
 bra-r.6   103853592   F-box/LRR-repeat protein At4g29420 
 bna-r.1   106386405   F-box/LRR-repeat protein At4g29420 
 bna-r.1   106397359   F-box/LRR-repeat protein At4g29420-like 
 ghi-r.1   107901136   F-box/LRR-repeat protein At4g29420 
 ghi-r.1   107962682   F-box/LRR-repeat protein At4g29420 
 cit-r.1   102612563   F-box/LRR-repeat protein At4g29420 
 gma-u.5   100795767   F-box/LRR-repeat protein At4g29420 
 mtr-u.5   11412372   F-box/LRR-repeat protein At4g29420 
 nta-r.1   107788607   F-box/LRR-repeat protein At4g29420 
 nta-r.1   107792529   F-box/LRR-repeat protein At4g29420 
 osa-u.5   4327310   F-box/LRR-repeat protein At4g29420 
 zma-u.5   100276016   uncharacterized LOC100276016 
 tae-r.2   123077424   F-box/LRR-repeat protein At4g29420 
 tae-r.2   123077423   F-box/LRR-repeat protein At4g29420 
 tae-r.2   123068895   F-box/LRR-repeat protein At4g29420 
 hvu-r.1   123442896   F-box/LRR-repeat protein At4g29420-like 
 sbi-r.1   8082841   F-box/LRR-repeat protein At4g29420 
 bdi-r.1   100828976   F-box/LRR-repeat protein At4g29420 

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Top 50 coexpressed genes to AT4G29420 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G29420 (ath-m.4.hor coexpression data)

CoexMap"829063"


athAT4G29420 | Entrez gene ID : 829063      
Species ath bra bna ghi cit gma mtr nta osa zma tae hvu sbi bdi sot sly ppo vvi cre
Paralog 9 1 2 2 1 1 1 2 1 1 3 1 1 1 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_194671.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for NP_194671.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for NP_194671.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT4G29420
ath-u.5
for
AT4G29420
ath-r.7
for
AT4G29420
ath-m.9
for
AT4G29420
ath-e.2
for
AT4G29420
ath-m.4.bio
for
AT4G29420
ath-m.4.lig
for
AT4G29420
ath-m.4.str
for
AT4G29420
ath-m.4.tis
for
AT4G29420
bra-r.6
for
103853592
bna-r.1
for
106386405
bna-r.1
for
106397359
ghi-r.1
for
107901136
ghi-r.1
for
107962682
cit-r.1
for
102612563
gma-u.5
for
100795767
mtr-u.5
for
11412372
nta-r.1
for
107788607
nta-r.1
for
107792529
osa-u.5
for
4327310
zma-u.5
for
100276016
tae-r.2
for
123077424
tae-r.2
for
123077423
tae-r.2
for
123068895
hvu-r.1
for
123442896
sbi-r.1
for
8082841
bdi-r.1
for
100828976


Ortholog ID: 12218
Species ath bra bna bna ghi ghi cit gma mtr nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT4G29420 LOC103853592 LOC106386405 LOC106397359 LOC107901136 LOC107962682 LOC102612563 LOC100795767 LOC11412372 LOC107788607 LOC107792529 LOC4327310 LOC100276016 LOC123077424 LOC123077423 LOC123060366 LOC123442896 LOC8082841 LOC100828976
Function* F-box/RNI-like superfamily protein F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420-like F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 uncharacterized LOC100276016 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420-like F-box/LRR-repeat protein At4g29420 F-box/LRR-repeat protein At4g29420
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829063 103853592 106386405 106397359 107901136 107962682 102612563 100795767 11412372 107788607 107792529 4327310 100276016 123077424 123077423 123060366 123442896 8082841 100828976
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