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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT4G38640   Plasma-membrane choline transporter family protein 
 ath-u.5   AT4G38640   Plasma-membrane choline transporter family protein 
 ath-r.7   AT4G38640   Plasma-membrane choline transporter family protein 
 ath-m.9   AT4G38640   Plasma-membrane choline transporter family protein 
 ath-e.2   AT4G38640   Plasma-membrane choline transporter family protein 
 ath-m.4.bio   AT4G38640   Plasma-membrane choline transporter family protein 
 ath-m.4.lig   AT4G38640   Plasma-membrane choline transporter family protein 
 ath-m.4.str   AT4G38640   Plasma-membrane choline transporter family protein 
 ath-m.4.tis   AT4G38640   Plasma-membrane choline transporter family protein 
 bra-r.6   103835172   CTL-like protein DDB_G0288717 
 bna-r.1   106361537   CTL-like protein DDB_G0288717 
 bna-r.1   106389908   CTL-like protein DDB_G0288717 
 bna-r.1   125577113   CTL-like protein DDB_G0288717 
 ghi-r.1   107916745   CTL-like protein DDB_G0288717 
 ghi-r.1   107922242   CTL-like protein DDB_G0288717 
 cit-r.1   102612505   uncharacterized LOC102612505 
 gma-u.5   100801313   choline transporter-like protein 5 
 gma-u.5   100810591   CTL-like protein DDB_G0274487 
 vvi-u.5   100250440   uncharacterized LOC100250440 
 ppo-u.5   7472129   uncharacterized LOC7472129 
 ppo-u.5   7470391   uncharacterized LOC7470391 
 mtr-u.5   25492780   CTL-like protein DDB_G0274487 
 sly-u.5   104644279   uncharacterized LOC104644279 
 sot-r.1   102592847   CTL-like protein DDB_G0288717 
 nta-r.1   107781108   uncharacterized LOC107781108 
 nta-r.1   107815512   uncharacterized LOC107815512 
 cre-r.1   CHLRE_14g617800v5   uncharacterized protein 
 cre-r.1   CHLRE_06g278550v5   uncharacterized protein 
 cre-r.1   CHLRE_09g390467v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G38640 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G38640 (ath-m.4.hor coexpression data)

CoexMap"830020"


athAT4G38640 | Entrez gene ID : 830020      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta cre sbi osa tae hvu zma bdi
Paralog 9 1 3 2 1 2 1 2 1 1 1 2 3 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO MF
Protein NP_568045.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  vacu 2,  golg 2  (predict for NP_568045.1)
Subcellular
localization
TargetP
other 8  (predict for NP_568045.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT4G38640
ath-u.5
for
AT4G38640
ath-r.7
for
AT4G38640
ath-m.9
for
AT4G38640
ath-e.2
for
AT4G38640
ath-m.4.bio
for
AT4G38640
ath-m.4.lig
for
AT4G38640
ath-m.4.str
for
AT4G38640
ath-m.4.tis
for
AT4G38640
bra-r.6
for
103835172
bna-r.1
for
106361537
bna-r.1
for
106389908
bna-r.1
for
125577113
ghi-r.1
for
107916745
ghi-r.1
for
107922242
cit-r.1
for
102612505
gma-u.5
for
100801313
gma-u.5
for
100810591
vvi-u.5
for
100250440
ppo-u.5
for
7472129
ppo-u.5
for
7470391
mtr-u.5
for
25492780
sly-u.5
for
104644279
sot-r.1
for
102592847
nta-r.1
for
107781108
nta-r.1
for
107815512
cre-r.1
for
CHLRE_14g617800v5
cre-r.1
for
CHLRE_06g278550v5
cre-r.1
for
CHLRE_09g390467v5


Ortholog ID: 11723
Species ath bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta cre cre cre
Symbol AT4G38640 LOC103835172 LOC106389908 LOC125577113 LOC106357686 LOC107916745 LOC107922242 LOC102612505 LOC100801313 LOC100810591 LOC100250440 LOC7472129 LOC7470391 LOC25492780 LOC104644279 LOC102592847 LOC107781108 LOC107815512 CHLRE_14g617800v5 CHLRE_06g278550v5 CHLRE_09g390467v5
Function* Plasma-membrane choline transporter family protein CTL-like protein DDB_G0288717 CTL-like protein DDB_G0288717 CTL-like protein DDB_G0288717 CTL-like protein DDB_G0288717 CTL-like protein DDB_G0288717 CTL-like protein DDB_G0288717 uncharacterized LOC102612505 choline transporter-like protein 5 CTL-like protein DDB_G0274487 uncharacterized LOC100250440 uncharacterized LOC7472129 uncharacterized LOC7470391 CTL-like protein DDB_G0274487 uncharacterized LOC104644279 CTL-like protein DDB_G0288717 uncharacterized LOC107781108 uncharacterized LOC107815512 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath00190 Oxidative phosphorylation 3
ath04145 Phagosome 3
ath04142 Lysosome 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo04626 Plant-pathogen interaction 2
ppo00062 Fatty acid elongation 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03018 RNA degradation 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly04145 Phagosome 4
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830020 103835172 106389908 125577113 106357686 107916745 107922242 102612505 100801313 100810591 100250440 7472129 7470391 25492780 104644279 102592847 107781108 107815512 5715843 5720887 5720636
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