Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G17460   glutamyl-tRNA (Gln) amidotransferase subunit C 
 ath-u.5   AT5G17460   glutamyl-tRNA (Gln) amidotransferase subunit C 
 ath-r.7   AT5G17460   glutamyl-tRNA (Gln) amidotransferase subunit C 
 ath-m.9   AT5G17460   glutamyl-tRNA (Gln) amidotransferase subunit C 
 ath-e.2   AT5G17460   glutamyl-tRNA (Gln) amidotransferase subunit C 
 ath-m.4.bio   AT5G17460   glutamyl-tRNA (Gln) amidotransferase subunit C 
 ath-m.4.lig   AT5G17460   glutamyl-tRNA (Gln) amidotransferase subunit C 
 ath-m.4.str   AT5G17460   glutamyl-tRNA (Gln) amidotransferase subunit C 
 ath-m.4.tis   AT5G17460   glutamyl-tRNA (Gln) amidotransferase subunit C 
 bra-r.6   103851110   uncharacterized LOC103851110 
 bna-r.1   106409107   uncharacterized LOC106409107 
 bna-r.1   106411256   uncharacterized LOC106411256 
 ghi-r.1   121228302   uncharacterized LOC121228302 
 ghi-r.1   107911562   uncharacterized LOC107911562 
 cit-r.1   102612798   uncharacterized LOC102612798 
 gma-u.5   100780489   uncharacterized LOC100780489 
 vvi-u.5   100245087   uncharacterized LOC100245087 
 vvi-u.5   100253581   uncharacterized LOC100253581 
 ppo-u.5   7487371   uncharacterized LOC7487371 
 mtr-u.5   11434226   uncharacterized LOC11434226 
 mtr-u.5   11423228   uncharacterized LOC11423228 
 sly-u.5   101260493   uncharacterized LOC101260493 
 sot-r.1   102598316   uncharacterized LOC102598316 
 nta-r.1   107804963   uncharacterized LOC107804963 
 nta-r.1   107781753   uncharacterized LOC107781753 
 osa-u.5   9271781   uncharacterized LOC9271781 
 zma-u.5   100276295   uncharacterized LOC100276295 
 tae-r.2   123076866   uncharacterized LOC123076866 
 tae-r.2   123068314   uncharacterized LOC123068314 
 tae-r.2   123059979   uncharacterized LOC123059979 
 hvu-r.1   123442465   uncharacterized LOC123442465 
 sbi-r.1   8070406   nucleolin 
 bdi-r.1   104582478   uncharacterized LOC104582478 

close


Top 50 coexpressed genes to AT5G17460 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G17460 (ath-m.4.hor coexpression data)

CoexMap"831612"


athAT5G17460 | Entrez gene ID : 831612      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 2 1 2 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000214 [list] [network] regulation of L-proline metabolic process  (5 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001318584.1 [sequence] [blastp]
NP_001331088.1 [sequence] [blastp]
NP_001331089.1 [sequence] [blastp]
NP_001331090.1 [sequence] [blastp]
NP_568348.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2  (predict for NP_001318584.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for NP_001331088.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for NP_001331089.1)
nucl 9,  cyto_nucl 5  (predict for NP_001331090.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for NP_568348.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001318584.1)
mito 8  (predict for NP_001331088.1)
mito 8  (predict for NP_001331089.1)
other 9  (predict for NP_001331090.1)
mito 8  (predict for NP_568348.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT5G17460
ath-u.5
for
AT5G17460
ath-r.7
for
AT5G17460
ath-m.9
for
AT5G17460
ath-e.2
for
AT5G17460
ath-m.4.bio
for
AT5G17460
ath-m.4.lig
for
AT5G17460
ath-m.4.str
for
AT5G17460
ath-m.4.tis
for
AT5G17460
bra-r.6
for
103851110
bna-r.1
for
106409107
bna-r.1
for
106411256
ghi-r.1
for
121228302
ghi-r.1
for
107911562
cit-r.1
for
102612798
gma-u.5
for
100780489
vvi-u.5
for
100245087
vvi-u.5
for
100253581
ppo-u.5
for
7487371
mtr-u.5
for
11434226
mtr-u.5
for
11423228
sly-u.5
for
101260493
sot-r.1
for
102598316
nta-r.1
for
107804963
nta-r.1
for
107781753
osa-u.5
for
9271781
zma-u.5
for
100276295
tae-r.2
for
123076866
tae-r.2
for
123068314
tae-r.2
for
123059979
hvu-r.1
for
123442465
sbi-r.1
for
8070406
bdi-r.1
for
104582478


Ortholog ID: 10304
Species ath bra bna bna ghi ghi cit gma vvi vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G17460 LOC103851110 LOC106409107 LOC106411256 LOC121228302 LOC107911562 LOC102612798 LOC100780489 LOC100245087 LOC100253581 LOC7487371 LOC11434226 LOC11423228 LOC101260493 LOC102598316 LOC107804963 LOC107781753 LOC9271781 LOC100276295 LOC123076866 LOC123068314 LOC123059979 LOC123442465 LOC8070406 LOC104582478
Function* glutamyl-tRNA (Gln) amidotransferase subunit C uncharacterized LOC103851110 uncharacterized LOC106409107 uncharacterized LOC106411256 uncharacterized LOC121228302 uncharacterized LOC107911562 uncharacterized LOC102612798 uncharacterized LOC100780489 uncharacterized LOC100245087 uncharacterized LOC100253581 uncharacterized LOC7487371 uncharacterized LOC11434226 uncharacterized LOC11423228 uncharacterized LOC101260493 uncharacterized LOC102598316 uncharacterized LOC107804963 uncharacterized LOC107781753 uncharacterized LOC9271781 uncharacterized LOC100276295 uncharacterized LOC123076866 uncharacterized LOC123068314 uncharacterized LOC123059979 uncharacterized LOC123442465 nucleolin uncharacterized LOC104582478
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna04144 Endocytosis 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03250 Viral life cycle - HIV-1 4
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03420 Nucleotide excision repair 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831612 103851110 106409107 106411256 121228302 107911562 102612798 100780489 100245087 100253581 7487371 11434226 11423228 101260493 102598316 107804963 107781753 9271781 100276295 123076866 123068314 123059979 123442465 8070406 104582478
The preparation time of this page was 0.1 [sec].