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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G02420   cyclin-dependent kinase inhibitor SMR3-like protein 
 ath-u.5   AT5G02420   cyclin-dependent kinase inhibitor SMR3-like protein 
 ath-r.7   AT5G02420   cyclin-dependent kinase inhibitor SMR3-like protein 
 ath-m.9   AT5G02420   cyclin-dependent kinase inhibitor SMR3-like protein 
 ath-e.2   AT5G02420   cyclin-dependent kinase inhibitor SMR3-like protein 
 ath-m.4.bio   AT5G02420   cyclin-dependent kinase inhibitor SMR3-like protein 
 ath-m.4.lig   AT5G02420   cyclin-dependent kinase inhibitor SMR3-like protein 
 ath-m.4.str   AT5G02420   cyclin-dependent kinase inhibitor SMR3-like protein 
 ath-m.4.tis   AT5G02420   cyclin-dependent kinase inhibitor SMR3-like protein 
 bra-r.6   103855467   cyclin-dependent protein kinase inhibitor SMR3 
 bra-r.6   103847451   cyclin-dependent protein kinase inhibitor SMR3-like 
 bna-r.1   125599927   cyclin-dependent protein kinase inhibitor SMR3-like 
 bna-r.1   125599918   cyclin-dependent protein kinase inhibitor SMR3-like 
 ghi-r.1   107899304   cyclin-dependent protein kinase inhibitor SMR3 
 ghi-r.1   107939923   cyclin-dependent protein kinase inhibitor SMR1 
 ghi-r.1   107948881   cyclin-dependent protein kinase inhibitor SMR3 
 cit-r.1   102614104   cyclin-dependent protein kinase inhibitor SMR3-like 
 ppo-u.5   7488123   cyclin-dependent protein kinase inhibitor SMR3 
 ppo-u.5   7465117   cyclin-dependent protein kinase inhibitor SMR3 
 mtr-u.5   120579863   cyclin-dependent protein kinase inhibitor SMR12 

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Top 50 coexpressed genes to AT5G02420 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G02420 (ath-m.4.hor coexpression data)

CoexMap"831836"


athAT5G02420 | Entrez gene ID : 831836      
Species ath bra bna ghi cit ppo mtr sbi osa gma sot sly tae hvu vvi zma cre nta bdi
Paralog 9 2 2 3 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032875 [list] [network] regulation of DNA endoreduplication  (36 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_195862.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  extr 2,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for NP_195862.1)
Subcellular
localization
TargetP
other 8  (predict for NP_195862.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT5G02420
ath-u.5
for
AT5G02420
ath-r.7
for
AT5G02420
ath-m.9
for
AT5G02420
ath-e.2
for
AT5G02420
ath-m.4.bio
for
AT5G02420
ath-m.4.lig
for
AT5G02420
ath-m.4.str
for
AT5G02420
ath-m.4.tis
for
AT5G02420
bra-r.6
for
103855467
bra-r.6
for
103847451
bna-r.1
for
125599927
bna-r.1
for
125599918
ghi-r.1
for
107899304
ghi-r.1
for
107939923
ghi-r.1
for
107948881
cit-r.1
for
102614104
ppo-u.5
for
7488123
ppo-u.5
for
7465117
mtr-u.5
for
120579863


Ortholog ID: 8146
Species ath bra bra bna ghi ghi ghi cit ppo ppo mtr
Symbol AT5G02420 LOC103855467 LOC103847451 LOC106433540 LOC107939923 LOC107948881 LOC107889693 LOC102614104 LOC7488123 LOC7465117 LOC120579863
Function* cyclin-dependent kinase inhibitor SMR3-like protein cyclin-dependent protein kinase inhibitor SMR3 cyclin-dependent protein kinase inhibitor SMR3-like cyclin-dependent protein kinase inhibitor SMR3 cyclin-dependent protein kinase inhibitor SMR1 cyclin-dependent protein kinase inhibitor SMR3 cyclin-dependent protein kinase inhibitor SMR3 cyclin-dependent protein kinase inhibitor SMR3-like cyclin-dependent protein kinase inhibitor SMR3 cyclin-dependent protein kinase inhibitor SMR3 cyclin-dependent protein kinase inhibitor SMR12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 6
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 6
ghi04626 Plant-pathogen interaction 6
ghi00561 Glycerolipid metabolism 4
ghi00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831836 103855467 103847451 106433540 107939923 107948881 107889693 102614104 7488123 7465117 120579863
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