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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-u.5   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-r.7   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.9   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-e.2   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.4.bio   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.4.lig   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.4.str   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.4.tis   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-u.5   TSC10A   NAD(P)-binding Rossmann-fold superfamily protein 
 bra-r.6   103854449   3-dehydrosphinganine reductase TSC10A 
 bna-r.1   106400578   3-dehydrosphinganine reductase TSC10A 
 bna-r.1   111206526   3-dehydrosphinganine reductase TSC10A-like 
 ghi-r.1   107899707   3-dehydrosphinganine reductase TSC10A 
 ghi-r.1   121229498   3-dehydrosphinganine reductase TSC10A 
 ghi-r.1   121217842   3-dehydrosphinganine reductase TSC10A 
 cit-r.1   102610829   3-dehydrosphinganine reductase TSC10A 
 gma-u.5   100804733   3-dehydrosphinganine reductase TSC10A 
 gma-u.5   100789771   3-dehydrosphinganine reductase TSC10A 
 vvi-u.5   100251050   3-dehydrosphinganine reductase TSC10A 
 ppo-u.5   18102699   3-dehydrosphinganine reductase TSC10A 
 mtr-u.5   25486113   3-dehydrosphinganine reductase TSC10A 
 sly-u.5   101262727   3-dehydrosphinganine reductase TSC10A 
 sot-r.1   102603207   3-dehydrosphinganine reductase TSC10A-like 
 sot-r.1   102600214   3-dehydrosphinganine reductase TSC10A-like 
 nta-r.1   107825367   3-dehydrosphinganine reductase TSC10B 
 nta-r.1   107801646   3-dehydrosphinganine reductase TSC10A 
 nta-r.1   107785912   3-dehydrosphinganine reductase TSC10A 
 osa-u.5   4330439   3-dehydrosphinganine reductase TSC10A 
 zma-u.5   100193352   3-ketodihydrosphingosine reductase 
 zma-u.5   100384036   uncharacterized LOC100384036 
 tae-r.2   123145194   3-dehydrosphinganine reductase TSC10A 
 tae-r.2   123137892   3-dehydrosphinganine reductase TSC10A 
 tae-r.2   123128105   3-dehydrosphinganine reductase TSC10A 
 hvu-r.1   123403340   3-dehydrosphinganine reductase TSC10A-like 
 sbi-r.1   8073166   3-dehydrosphinganine reductase TSC10A 
 bdi-r.1   100842960   3-dehydrosphinganine reductase TSC10A 
 cre-r.1   CHLRE_17g702750v5   uncharacterized protein 

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Top 50 coexpressed genes to TSC10B (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TSC10B (ath-m.4.hor coexpression data)

CoexMap"832040"


athTSC10B | Entrez gene ID : 832040      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 2 3 1 2 1 1 1 1 2 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00600 [list] [network] Sphingolipid metabolism (35 genes)
ath04382 [list] [network] Cornified envelope formation (35 genes)
GO BP
GO:0006666 [list] [network] 3-keto-sphinganine metabolic process  (2 genes)  ISS  
GO:0030148 [list] [network] sphingolipid biosynthetic process  (23 genes)  IMP ISS  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (120 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0047560 [list] [network] 3-dehydrosphinganine reductase activity  (2 genes)  IDA  
GO:0070402 [list] [network] NADPH binding  (3 genes)  ISS  
Protein NP_197421.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  extr 1  (predict for NP_197421.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_197421.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
TSC10B
ath-u.5
for
TSC10B
ath-r.7
for
TSC10B
ath-m.9
for
TSC10B
ath-e.2
for
TSC10B
ath-m.4.bio
for
TSC10B
ath-m.4.lig
for
TSC10B
ath-m.4.str
for
TSC10B
ath-m.4.tis
for
TSC10B
ath-u.5
for
TSC10A
bra-r.6
for
103854449
bna-r.1
for
106400578
bna-r.1
for
111206526
ghi-r.1
for
107899707
ghi-r.1
for
121229498
ghi-r.1
for
121217842
cit-r.1
for
102610829
gma-u.5
for
100804733
gma-u.5
for
100789771
vvi-u.5
for
100251050
ppo-u.5
for
18102699
mtr-u.5
for
25486113
sly-u.5
for
101262727
sot-r.1
for
102603207
sot-r.1
for
102600214
nta-r.1
for
107825367
nta-r.1
for
107801646
nta-r.1
for
107785912
osa-u.5
for
4330439
zma-u.5
for
100193352
zma-u.5
for
100384036
tae-r.2
for
123145194
tae-r.2
for
123137892
tae-r.2
for
123128105
hvu-r.1
for
123403340
sbi-r.1
for
8073166
bdi-r.1
for
100842960
cre-r.1
for
CHLRE_17g702750v5


Ortholog ID: 5722
Species ath ath bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol TSC10B TSC10A LOC103854449 LOC106400578 LOC111206526 LOC107899707 LOC121217842 LOC107957006 LOC102610829 LOC100804733 LOC100789771 LOC100251050 LOC18102699 LOC25486113 LOC101262727 LOC102603207 LOC102600214 LOC107801646 LOC107782703 LOC107790734 LOC4330439 LOC100193352 LOC100384036 LOC123145194 LOC123137892 LOC123128105 LOC123403340 LOC8073166 LOC100842960 CHLRE_17g702750v5
Function* NAD(P)-binding Rossmann-fold superfamily protein NAD(P)-binding Rossmann-fold superfamily protein 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A-like 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A-like 3-dehydrosphinganine reductase TSC10A-like 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10B-like 3-dehydrosphinganine reductase TSC10A 3-ketodihydrosphingosine reductase uncharacterized LOC100384036 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A-like 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00600 Sphingolipid metabolism 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath00600 Sphingolipid metabolism 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 4
bra04141 Protein processing in endoplasmic reticulum 4
bra00513 Various types of N-glycan biosynthesis 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
bna00600 Sphingolipid metabolism 2
bna04382 Cornified envelope formation 2
bna04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 3
ghi04382 Cornified envelope formation 3
ghi00440 Phosphonate and phosphinate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 4
nta04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00785 Lipoic acid metabolism 5
nta00600 Sphingolipid metabolism 4
nta04382 Cornified envelope formation 4
nta00010 Glycolysis / Gluconeogenesis 3
nta00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta00020 Citrate cycle (TCA cycle) 4
nta00620 Pyruvate metabolism 4
nta00785 Lipoic acid metabolism 4
nta01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00600 Sphingolipid metabolism 4
osa04382 Cornified envelope formation 3
osa01212 Fatty acid metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 7
zma04382 Cornified envelope formation 6
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 5
zma04382 Cornified envelope formation 4
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 9
tae04382 Cornified envelope formation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 7
tae04382 Cornified envelope formation 7
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 7
tae04382 Cornified envelope formation 7
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 3
sbi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832040 819779 103854449 106400578 111206526 107899707 121217842 107957006 102610829 100804733 100789771 100251050 18102699 25486113 101262727 102603207 102600214 107801646 107782703 107790734 4330439 100193352 100384036 123145194 123137892 123128105 123403340 8073166 100842960 5717272
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