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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   ERA1   Prenyltransferase family protein 
 ath-u.5   ERA1   Prenyltransferase family protein 
 ath-r.7   ERA1   Prenyltransferase family protein 
 ath-m.9   ERA1   Prenyltransferase family protein 
 ath-e.2   ERA1   Prenyltransferase family protein 
 ath-m.4.bio   ERA1   Prenyltransferase family protein 
 ath-m.4.lig   ERA1   Prenyltransferase family protein 
 ath-m.4.str   ERA1   Prenyltransferase family protein 
 ath-m.4.tis   ERA1   Prenyltransferase family protein 
 bra-r.6   103863970   protein farnesyltransferase subunit beta 
 bna-r.1   106402436   protein farnesyltransferase subunit beta 
 ghi-r.1   107892292   protein farnesyltransferase subunit beta 
 ghi-r.1   107888645   protein farnesyltransferase subunit beta 
 cit-r.1   102620973   protein farnesyltransferase subunit beta 
 gma-u.5   ERA1A   farnesyltransferase 
 gma-u.5   ERA1B   farnesyltransferase ERA1B 
 vvi-u.5   100266301   protein farnesyltransferase subunit beta 
 ppo-u.5   18107281   protein farnesyltransferase subunit beta 
 mtr-u.5   25495171   protein farnesyltransferase subunit beta 
 sly-u.5   FTB   farnesyl protein transferase subunit B 
 sot-r.1   102589815   protein farnesyltransferase subunit beta 
 nta-r.1   107827532   protein farnesyltransferase subunit beta 
 nta-r.1   107777651   protein farnesyltransferase subunit beta-like 
 osa-u.5   4327880   protein farnesyltransferase subunit beta 
 zma-u.5   100272584   uncharacterized LOC100272584 
 tae-r.2   123061975   protein farnesyltransferase subunit beta 
 tae-r.2   123079088   protein farnesyltransferase subunit beta 
 tae-r.2   100127062   protein farnesyltransferase subunit beta 
 hvu-r.1   123444351   protein farnesyltransferase subunit beta 
 sbi-r.1   8062157   protein farnesyltransferase subunit beta 
 bdi-r.1   100845294   protein farnesyltransferase subunit beta 
 cre-r.1   CHLRE_14g612500v5   uncharacterized protein 

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Top 50 coexpressed genes to ERA1 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ERA1 (ath-m.4.hor coexpression data)

CoexMap"834026"


athERA1 | Entrez gene ID : 834026      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (61 genes)
GO BP
GO:0018343 [list] [network] protein farnesylation  (3 genes)  ISS  
GO:1990069 [list] [network] stomatal opening  (5 genes)  IMP  
GO:0018342 [list] [network] protein prenylation  (9 genes)  IMP  
GO:0009934 [list] [network] regulation of meristem structural organization  (22 genes)  IMP  
GO:0160062 [list] [network] cutin-based cuticle development  (38 genes)  IMP  
GO:1901000 [list] [network] regulation of response to salt stress  (44 genes)  IMP  
GO:0047484 [list] [network] regulation of response to osmotic stress  (53 genes)  IMP  
GO:0009788 [list] [network] negative regulation of abscisic acid-activated signaling pathway  (62 genes)  IMP  
GO:0009620 [list] [network] response to fungus  (400 genes)  IGI  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO CC
GO:0005965 [list] [network] protein farnesyltransferase complex  (1 genes)  IMP ISS  
GO MF
GO:0004660 [list] [network] protein farnesyltransferase activity  (2 genes)  IEA IMP ISS  
GO:0004311 [list] [network] geranylgeranyl diphosphate synthase activity  (9 genes)  ISS  
GO:0008270 [list] [network] zinc ion binding  (391 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001331518.1 [sequence] [blastp]
NP_198844.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 3,  chlo 2,  cyto_nucl 2,  cysk_nucl 2  (predict for NP_001331518.1)
mito 4,  chlo 3,  nucl 3,  cyto_mito 3  (predict for NP_198844.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001331518.1)
mito 8  (predict for NP_198844.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
ERA1
ath-u.5
for
ERA1
ath-r.7
for
ERA1
ath-m.9
for
ERA1
ath-e.2
for
ERA1
ath-m.4.bio
for
ERA1
ath-m.4.lig
for
ERA1
ath-m.4.str
for
ERA1
ath-m.4.tis
for
ERA1
bra-r.6
for
103863970
bna-r.1
for
106402436
ghi-r.1
for
107892292
ghi-r.1
for
107888645
cit-r.1
for
102620973
gma-u.5
for
ERA1A
gma-u.5
for
ERA1B
vvi-u.5
for
100266301
ppo-u.5
for
18107281
mtr-u.5
for
25495171
sly-u.5
for
FTB
sot-r.1
for
102589815
nta-r.1
for
107827532
nta-r.1
for
107777651
osa-u.5
for
4327880
zma-u.5
for
100272584
tae-r.2
for
123061975
tae-r.2
for
123079088
tae-r.2
for
100127062
hvu-r.1
for
123444351
sbi-r.1
for
8062157
bdi-r.1
for
100845294
cre-r.1
for
CHLRE_14g612500v5


Ortholog ID: 8633
Species ath bra bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol ERA1 LOC103863970 LOC106446141 LOC107892292 LOC107888645 LOC102620973 ERA1A ERA1B LOC100266301 LOC18107281 LOC25495171 FTB LOC102589815 LOC107827532 LOC107777651 LOC4327880 LOC100272584 LOC123061975 LOC123079088 LOC100127062 LOC123444351 LOC8062157 LOC100845294 CHLRE_14g612500v5
Function* Prenyltransferase family protein protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta-like protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta farnesyltransferase farnesyltransferase ERA1B protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta farnesyl protein transferase subunit B protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta-like protein farnesyltransferase subunit beta uncharacterized LOC100272584 protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta protein farnesyltransferase subunit beta uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 11
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi00900 Terpenoid backbone biosynthesis 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi00270 Cysteine and methionine metabolism 2
ghi00566 Sulfoquinovose metabolism 2
ghi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00900 Terpenoid backbone biosynthesis 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00900 Terpenoid backbone biosynthesis 2
gma03040 Spliceosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04145 Phagosome 3
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo00900 Terpenoid backbone biosynthesis 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03010 Ribosome 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 3
nta00531 Glycosaminoglycan degradation 2
nta00900 Terpenoid backbone biosynthesis 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
nta04142 Lysosome 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 6
tae04144 Endocytosis 2
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04517 IgSF CAM signaling 4
tae00900 Terpenoid backbone biosynthesis 4
tae04136 Autophagy - other 3
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 5
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
cre04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834026 103863970 106446141 107892292 107888645 102620973 100814543 100306703 100266301 18107281 25495171 544037 102589815 107827532 107777651 4327880 100272584 123061975 123079088 100127062 123444351 8062157 100845294 5724532
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